Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN5P54829 uc_338.10-201ENST00000621872 182 ntBASIC2.84□□□□□ -1.95
PTPN5P54829 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.96
PTPN5P54829 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTPN5P54829 MIR26A1-201ENST00000362205 77 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 RNU6-495P-201ENST00000362995 107 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 RNU6-1053P-201ENST00000515930 101 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 SNORD111.1-201ENST00000516421 86 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPN5P54829 MIR4781-201ENST00000585250 76 ntBASIC2.83□□□□□ -1.96
PTPN5P54829 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN5P54829 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN5P54829 RNU6-322P-201ENST00000516010 103 ntBASIC2.82□□□□□ -1.96
PTPN5P54829 RNU6-980P-201ENST00000516925 103 ntBASIC2.82□□□□□ -1.96
PTPN5P54829 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
PTPN5P54829 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTPN5P54829 MIR377-201ENST00000362145 69 ntBASIC2.81□□□□□ -1.96
PTPN5P54829 RN7SKP223-201ENST00000410582 62 ntBASIC2.81□□□□□ -1.96
PTPN5P54829 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
PTPN5P54829 MIR18B-201ENST00000454574 71 ntBASIC2.81□□□□□ -1.96
PTPN5P54829 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPN5P54829 RNU6-403P-201ENST00000363163 104 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 RNU6-580P-201ENST00000365159 107 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 MIR194-1-201ENST00000384892 85 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 MIR599-201ENST00000385069 95 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 SNORD41-201ENST00000386967 70 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 RNA5SP465-201ENST00000391195 109 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 SUMO2P12-201ENST00000405924 140 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.8□□□□□ -1.96
PTPN5P54829 RNU6-287P-201ENST00000516230 98 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 MIR548AD-201ENST00000584780 82 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 MIR6509-201ENST00000614603 85 ntBASIC2.8□□□□□ -1.96
PTPN5P54829 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPN5P54829 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
PTPN5P54829 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN5P54829 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.79□□□□□ -1.96
PTPN5P54829 AL356320.1-201ENST00000429616 163 ntBASIC2.79□□□□□ -1.96
PTPN5P54829 snoU13.25-201ENST00000458945 104 ntBASIC2.79□□□□□ -1.96
PTPN5P54829 MIR2115-201ENST00000516657 100 ntBASIC2.79□□□□□ -1.96
PTPN5P54829 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
PTPN5P54829 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PTPN5P54829 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PTPN5P54829 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN5P54829 RNU6-203P-201ENST00000384038 104 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 RNU1-148P-201ENST00000384472 162 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 RNU6-35P-201ENST00000384530 107 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PTPN5P54829 RNA5SP501-201ENST00000410990 112 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 RN7SL274P-201ENST00000492268 272 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 AP003716.2-201ENST00000528260 108 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 AC015688.6-201ENST00000577737 104 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 MIR6082-201ENST00000613604 109 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.78□□□□□ -1.96
PTPN5P54829 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN5P54829 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PTPN5P54829 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN5P54829 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN5P54829 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
PTPN5P54829 SNORD114-1-201ENST00000362705 72 ntBASIC2.77□□□□□ -1.97
PTPN5P54829 AL359511.1-201ENST00000402970 211 ntBASIC2.77□□□□□ -1.97
PTPN5P54829 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
PTPN5P54829 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.77□□□□□ -1.97
PTPN5P54829 RNU6-656P-201ENST00000516785 107 ntBASIC2.77□□□□□ -1.97
PTPN5P54829 Y_RNA.13-201ENST00000362403 112 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 RNU6-360P-201ENST00000390944 104 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 AC138907.6-201ENST00000568401 126 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 AC138869.1-201ENST00000568623 124 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 MIR3657-201ENST00000584818 117 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 MIR6516-201ENST00000630554 81 ntBASIC2.76□□□□□ -1.97
PTPN5P54829 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN5P54829 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
PTPN5P54829 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 RNU6-520P-201ENST00000384717 104 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 MIR203A-201ENST00000384836 110 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 MIR518A2-201ENST00000384966 87 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 RNU6-1089P-201ENST00000516473 104 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 RNU6-765P-201ENST00000516916 99 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 NAMPTP3-201ENST00000569273 224 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.75□□□□□ -1.97
PTPN5P54829 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN5P54829 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PTPN5P54829 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTPN5P54829 AC004965.1-201ENST00000413033 213 ntBASIC2.74□□□□□ -1.97
PTPN5P54829 HMGN2P23-201ENST00000456759 269 ntBASIC2.74□□□□□ -1.97
PTPN5P54829 MIR3126-201ENST00000577443 74 ntBASIC2.74□□□□□ -1.97
PTPN5P54829 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
PTPN5P54829 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PTPN5P54829 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTPN5P54829 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTPN5P54829 MIR27B-201ENST00000385129 97 ntBASIC2.73□□□□□ -1.97
PTPN5P54829 RNA5SP100-201ENST00000410903 110 ntBASIC2.73□□□□□ -1.97
PTPN5P54829 RNA5SP59-201ENST00000410922 110 ntBASIC2.73□□□□□ -1.97
PTPN5P54829 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
PTPN5P54829 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.73□□□□□ -1.97
PTPN5P54829 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.73□□□□□ -1.97
PTPN5P54829 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 319.5 ms