Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR8074-201ENST00000615081 81 ntBASIC1.76□□□□□ -2.13
EPHB3P54753 MIR6516-201ENST00000630554 81 ntBASIC1.76□□□□□ -2.13
EPHB3P54753 RNU6-1094P-201ENST00000362416 104 ntBASIC1.75□□□□□ -2.13
EPHB3P54753 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
EPHB3P54753 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
EPHB3P54753 MIR4498-201ENST00000577599 66 ntBASIC1.75□□□□□ -2.13
EPHB3P54753 MIR4796-201ENST00000580742 81 ntBASIC1.75□□□□□ -2.13
EPHB3P54753 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
EPHB3P54753 SNORA63.2-201ENST00000362603 126 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 RNU6-580P-201ENST00000365159 107 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 RNU6-811P-201ENST00000384069 107 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 Y_RNA.545-201ENST00000384652 105 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 Y_RNA.565-201ENST00000384719 101 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 RNU6-1254P-201ENST00000391266 104 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 AC245517.4-201ENST00000448601 281 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 AL133373.1-201ENST00000497098 94 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.74□□□□□ -2.13
EPHB3P54753 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
EPHB3P54753 MIRLET7A1-201ENST00000362295 80 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 MIR516A2-201ENST00000384888 90 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 MIR516A1-201ENST00000385033 90 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 RNU6-788P-201ENST00000390967 104 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 RNU4-62P-201ENST00000410125 130 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 FGF7P7-201ENST00000514120 227 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 RNU6-75P-201ENST00000515944 104 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 MIR4303-201ENST00000581299 66 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.73□□□□□ -2.13
EPHB3P54753 Y_RNA.283-201ENST00000364798 112 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 RNU6-686P-201ENST00000364839 107 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 Y_RNA.588-201ENST00000391254 102 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 MIR934-201ENST00000401241 83 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 Y_RNA.660-201ENST00000516002 120 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
EPHB3P54753 MIR4536-1-201ENST00000583537 88 ntBASIC1.72□□□□□ -2.13
EPHB3P54753 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
EPHB3P54753 RNA5SP264-201ENST00000363115 107 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 RNU4-58P-201ENST00000363192 141 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 RNU6-53P-201ENST00000365367 106 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 RNA5SP292-201ENST00000390974 118 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 RNU6-243P-201ENST00000391140 107 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 MIR18B-201ENST00000454574 71 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 AC023790.1-201ENST00000482174 347 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 Y_RNA.676-201ENST00000516393 96 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 MIR4491-201ENST00000581087 68 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 MIR3064-201ENST00000581130 66 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 AC104996.3-201ENST00000590718 94 ntBASIC1.71□□□□□ -2.14
EPHB3P54753 MIR103A2-201ENST00000362154 78 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 MIR302D-201ENST00000362275 68 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 RNU6-654P-201ENST00000364373 107 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 RNU6-1194P-201ENST00000516208 104 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 RNU6-531P-201ENST00000516694 104 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 SNORA25.16-201ENST00000516741 121 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 SNORD92-201ENST00000585078 85 ntBASIC1.7□□□□□ -2.14
EPHB3P54753 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
EPHB3P54753 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
EPHB3P54753 RNU6-132P-201ENST00000383863 107 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 RNU6-466P-201ENST00000391224 103 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 RNU7-106P-201ENST00000459514 67 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 RNU6-947P-201ENST00000516264 106 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 RNU6-523P-201ENST00000516304 54 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 SNORA18.5-201ENST00000516616 101 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 Y_RNA.788-201ENST00000622394 112 ntBASIC1.69□□□□□ -2.14
EPHB3P54753 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
EPHB3P54753 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
EPHB3P54753 RNU1-36P-201ENST00000365130 165 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 MIR520H-201ENST00000385126 88 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 MIR519A1-201ENST00000385257 85 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 RNU6-380P-201ENST00000410207 107 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 SNORD63B-201ENST00000411005 70 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 AC004223.1-201ENST00000479840 271 ntBASIC1.68□□□□□ -2.14
EPHB3P54753 MIR548U-201ENST00000390728 81 ntBASIC1.67□□□□□ -2.14
EPHB3P54753 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
EPHB3P54753 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
EPHB3P54753 RNA5SP95-201ENST00000410319 137 ntBASIC1.67□□□□□ -2.14
EPHB3P54753 RNU6-161P-201ENST00000363051 106 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 Y_RNA.164-201ENST00000363709 102 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 RNU1-42P-201ENST00000364033 160 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 SNORA25.9-201ENST00000365087 128 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 Y_RNA.491-201ENST00000384417 107 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 SCARNA18B-201ENST00000458806 135 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
EPHB3P54753 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
EPHB3P54753 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 Y_RNA.532-201ENST00000384590 113 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 MIR518E-201ENST00000385252 88 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 SNORD100-201ENST00000408573 76 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.65□□□□□ -2.15
EPHB3P54753 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 MIR8063-201ENST00000621930 81 ntBASIC1.65□□□□□ -2.15
EPHB3P54753 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms