Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.66□□□□□ -2.3
CLCNKAP51800 AP001362.1-201ENST00000625165 124 ntBASIC0.66□□□□□ -2.3
CLCNKAP51800 RNU4-67P-201ENST00000364569 141 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 RNA5SP117-201ENST00000365294 118 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 Y_RNA.353-201ENST00000365440 108 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 Y_RNA.549-201ENST00000384657 102 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 RNU6-535P-201ENST00000384722 107 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 MIR548A3-201ENST00000385297 97 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 AC007012.1-201ENST00000567192 175 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 MIR4500-201ENST00000579472 76 ntBASIC0.65□□□□□ -2.31
CLCNKAP51800 RNU6-22P-201ENST00000384355 107 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 RNU6-816P-201ENST00000390914 107 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 RNU6-1268P-201ENST00000391214 107 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 RNU6-1239P-201ENST00000391310 107 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 AL353813.1-201ENST00000440700 253 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 SNORA31.14-201ENST00000516728 116 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 uc_338.16-201ENST00000621804 95 ntBASIC0.64□□□□□ -2.31
CLCNKAP51800 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 RNU6-363P-201ENST00000362895 105 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 SNORA63.5-201ENST00000363548 123 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 RNU6-1117P-201ENST00000384525 104 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 RNU6-429P-201ENST00000384582 108 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 MIR644A-201ENST00000385262 94 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.63□□□□□ -2.31
CLCNKAP51800 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.63□□□□□ -2.31
CLCNKAP51800 AL670379.3-201ENST00000605040 251 ntBASIC0.63□□□□□ -2.31
CLCNKAP51800 Y_RNA.155-201ENST00000363632 101 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 RNA5SP245-201ENST00000364239 121 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 BX276092.1-201ENST00000427368 251 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 AL162726.3-218ENST00000636401 95 ntBASIC0.62□□□□□ -2.31
CLCNKAP51800 RNU6-409P-201ENST00000384114 104 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 Y_RNA.507-201ENST00000384500 99 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 Y_RNA.563-201ENST00000384707 108 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 RNU6-1168P-201ENST00000390831 104 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 RNU6-62P-201ENST00000516526 102 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 AL512310.12-203ENST00000640543 90 ntBASIC0.61□□□□□ -2.31
CLCNKAP51800 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CLCNKAP51800 Y_RNA.85-201ENST00000363014 111 ntBASIC0.6□□□□□ -2.31
CLCNKAP51800 SNORD113-1-201ENST00000365321 69 ntBASIC0.6□□□□□ -2.31
CLCNKAP51800 MIR4679-2-201ENST00000578358 77 ntBASIC0.6□□□□□ -2.31
CLCNKAP51800 RNU6-1313P-201ENST00000362622 102 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 Y_RNA.56-201ENST00000362798 112 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 Y_RNA.174-201ENST00000363781 105 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 RNU4-45P-201ENST00000365469 141 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 RNU6-1154P-201ENST00000391001 104 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 RPL39P34-201ENST00000477141 156 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 RNU6-469P-201ENST00000516253 101 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 RNU6-789P-201ENST00000517105 102 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
CLCNKAP51800 Y_RNA.247-201ENST00000364500 92 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 RNA5SP205-201ENST00000364653 136 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 SNORD116-21-201ENST00000384507 92 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 MIR489-201ENST00000384923 84 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 AL606753.1-201ENST00000427435 87 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 RNU6-479P-201ENST00000516348 105 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 RNU6-406P-201ENST00000516470 107 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 RNU6-1006P-201ENST00000516998 103 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
CLCNKAP51800 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.58□□□□□ -2.32
CLCNKAP51800 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
CLCNKAP51800 Y_RNA.35-201ENST00000362601 101 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 Y_RNA.118-201ENST00000363300 101 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 Y_RNA.309-201ENST00000365046 111 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 RNU6-880P-201ENST00000384526 107 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 SNORA19-201ENST00000384737 128 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 RNA5SP436-201ENST00000516020 115 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 RNU6-313P-201ENST00000516317 112 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 RNA5SP94-201ENST00000516917 108 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 MIR548H5-201ENST00000580314 60 ntBASIC0.57□□□□□ -2.32
CLCNKAP51800 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CLCNKAP51800 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 RNU6-1201P-201ENST00000384227 107 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 RNU6-476P-201ENST00000384726 107 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 Y_RNA.567-201ENST00000384736 106 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.56□□□□□ -2.32
CLCNKAP51800 SNRPGP12-201ENST00000449481 213 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 TRAJ51-201ENST00000504127 63 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 AC068339.1-201ENST00000526965 141 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.56□□□□□ -2.32
CLCNKAP51800 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.56□□□□□ -2.32
CLCNKAP51800 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 U8.6-201ENST00000364939 135 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 RNU6-1064P-201ENST00000410626 104 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 RNU2-51P-201ENST00000410708 197 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 RNU6-1018P-201ENST00000516577 106 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 MTND5P40-201ENST00000559945 246 ntBASIC0.55□□□□□ -2.32
CLCNKAP51800 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms