Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MRE11P49959 RNU6-1165P-201ENST00000410119 107 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RPS29P28-201ENST00000446439 141 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RNU7-62P-201ENST00000458856 62 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RNU6-844P-201ENST00000517175 102 ntBASIC1.57□□□□□ -2.16
MRE11P49959 Y_RNA.467-201ENST00000384297 102 ntBASIC1.56□□□□□ -2.16
MRE11P49959 MRPL35P3-201ENST00000421557 364 ntBASIC1.56□□□□□ -2.16
MRE11P49959 AC109327.2-201ENST00000448339 378 ntBASIC1.56□□□□□ -2.16
MRE11P49959 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
MRE11P49959 MIR4439-201ENST00000583746 80 ntBASIC1.56□□□□□ -2.16
MRE11P49959 uc_338.6-201ENST00000613544 171 ntBASIC1.56□□□□□ -2.16
MRE11P49959 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MRE11P49959 RNA5SP95-201ENST00000410319 137 ntBASIC1.55□□□□□ -2.16
MRE11P49959 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
MRE11P49959 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.55□□□□□ -2.16
MRE11P49959 AC133485.1-201ENST00000567176 124 ntBASIC1.55□□□□□ -2.16
MRE11P49959 U7.3-201ENST00000616123 62 ntBASIC1.55□□□□□ -2.16
MRE11P49959 AP001362.1-201ENST00000625165 124 ntBASIC1.55□□□□□ -2.16
MRE11P49959 Y_RNA.96-201ENST00000363092 109 ntBASIC1.54□□□□□ -2.16
MRE11P49959 Y_RNA.168-201ENST00000363740 102 ntBASIC1.54□□□□□ -2.16
MRE11P49959 RNU6-580P-201ENST00000365159 107 ntBASIC1.54□□□□□ -2.16
MRE11P49959 Y_RNA.558-201ENST00000384685 113 ntBASIC1.54□□□□□ -2.16
MRE11P49959 RNU6-162P-201ENST00000516228 103 ntBASIC1.54□□□□□ -2.16
MRE11P49959 Y_RNA.705-201ENST00000516862 110 ntBASIC1.54□□□□□ -2.16
MRE11P49959 AL590095.2-201ENST00000604136 117 ntBASIC1.54□□□□□ -2.16
MRE11P49959 SEPT14P17-201ENST00000617978 177 ntBASIC1.54□□□□□ -2.16
MRE11P49959 RNU6-1163P-201ENST00000364516 107 ntBASIC1.53□□□□□ -2.16
MRE11P49959 RNY1P2-201ENST00000364820 117 ntBASIC1.53□□□□□ -2.16
MRE11P49959 MT-TF-201ENST00000387314 71 ntBASIC1.53□□□□□ -2.16
MRE11P49959 U8.15-201ENST00000390947 134 ntBASIC1.53□□□□□ -2.16
MRE11P49959 MIR548G-201ENST00000408442 89 ntBASIC1.53□□□□□ -2.16
MRE11P49959 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
MRE11P49959 SNORA72.7-201ENST00000516349 94 ntBASIC1.53□□□□□ -2.16
MRE11P49959 RNA5SP121-201ENST00000516537 101 ntBASIC1.53□□□□□ -2.16
MRE11P49959 MIR6086-201ENST00000638065 55 ntBASIC1.53□□□□□ -2.16
MRE11P49959 SNORD73B-201ENST00000364394 72 ntBASIC1.52□□□□□ -2.17
MRE11P49959 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
MRE11P49959 SNORD38.2-201ENST00000384470 69 ntBASIC1.52□□□□□ -2.17
MRE11P49959 RNU6-813P-201ENST00000384691 107 ntBASIC1.52□□□□□ -2.17
MRE11P49959 RNU6-972P-201ENST00000391208 107 ntBASIC1.52□□□□□ -2.17
MRE11P49959 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
MRE11P49959 RN7SKP88-201ENST00000516847 250 ntBASIC1.52□□□□□ -2.17
MRE11P49959 AC138749.4-201ENST00000563970 127 ntBASIC1.52□□□□□ -2.17
MRE11P49959 7SK.8-201ENST00000612110 250 ntBASIC1.52□□□□□ -2.17
MRE11P49959 7SK.11-201ENST00000615477 250 ntBASIC1.52□□□□□ -2.17
MRE11P49959 7SK.13-201ENST00000622040 250 ntBASIC1.52□□□□□ -2.17
MRE11P49959 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
MRE11P49959 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
MRE11P49959 MIR1302-4-201ENST00000408701 150 ntBASIC1.51□□□□□ -2.17
MRE11P49959 RNU6-887P-201ENST00000410660 100 ntBASIC1.51□□□□□ -2.17
MRE11P49959 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
MRE11P49959 AC026421.1-201ENST00000519101 163 ntBASIC1.51□□□□□ -2.17
MRE11P49959 MIR5000-201ENST00000577717 103 ntBASIC1.51□□□□□ -2.17
MRE11P49959 RNU6-90P-201ENST00000606352 106 ntBASIC1.51□□□□□ -2.17
MRE11P49959 RNU6-86P-201ENST00000606534 107 ntBASIC1.51□□□□□ -2.17
MRE11P49959 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.51□□□□□ -2.17
MRE11P49959 AL109933.3-201ENST00000619095 188 ntBASIC1.51□□□□□ -2.17
MRE11P49959 MIR6767-201ENST00000637302 66 ntBASIC1.51□□□□□ -2.17
MRE11P49959 SPINT5P-201ENST00000448174 155 ntBASIC1.5□□□□□ -2.17
MRE11P49959 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.5□□□□□ -2.17
MRE11P49959 SNORA31.2-201ENST00000516019 134 ntBASIC1.5□□□□□ -2.17
MRE11P49959 RNU6-762P-201ENST00000517107 102 ntBASIC1.5□□□□□ -2.17
MRE11P49959 U6.109-201ENST00000636749 87 ntBASIC1.5□□□□□ -2.17
MRE11P49959 HSBP1P2-201ENST00000299671 229 ntBASIC1.49□□□□□ -2.17
MRE11P49959 RNU6-1244P-201ENST00000363614 108 ntBASIC1.49□□□□□ -2.17
MRE11P49959 Y_RNA.173-201ENST00000363776 113 ntBASIC1.49□□□□□ -2.17
MRE11P49959 Y_RNA.567-201ENST00000384736 106 ntBASIC1.49□□□□□ -2.17
MRE11P49959 MIR18B-201ENST00000454574 71 ntBASIC1.49□□□□□ -2.17
MRE11P49959 MTND5P40-201ENST00000559945 246 ntBASIC1.49□□□□□ -2.17
MRE11P49959 AC012676.2-201ENST00000619258 186 ntBASIC1.49□□□□□ -2.17
MRE11P49959 Y_RNA.363-201ENST00000365529 113 ntBASIC1.48□□□□□ -2.17
MRE11P49959 SNORA2B-201ENST00000384583 137 ntBASIC1.48□□□□□ -2.17
MRE11P49959 MIR222-201ENST00000384992 110 ntBASIC1.48□□□□□ -2.17
MRE11P49959 SNORA75.2-201ENST00000391138 150 ntBASIC1.48□□□□□ -2.17
MRE11P49959 SNORA75.3-201ENST00000391231 150 ntBASIC1.48□□□□□ -2.17
MRE11P49959 AC090897.1-201ENST00000580909 226 ntBASIC1.48□□□□□ -2.17
MRE11P49959 AC103810.7-201ENST00000607821 91 ntBASIC1.48□□□□□ -2.17
MRE11P49959 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
MRE11P49959 RNA5SP133-201ENST00000363368 119 ntBASIC1.47□□□□□ -2.17
MRE11P49959 Y_RNA.190-201ENST00000363964 101 ntBASIC1.47□□□□□ -2.17
MRE11P49959 RNU6-1134P-201ENST00000365156 101 ntBASIC1.47□□□□□ -2.17
MRE11P49959 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
MRE11P49959 SNORD58A-201ENST00000383875 65 ntBASIC1.47□□□□□ -2.17
MRE11P49959 snoU13.21-201ENST00000459368 105 ntBASIC1.47□□□□□ -2.17
MRE11P49959 RNA5SP330-201ENST00000517096 96 ntBASIC1.47□□□□□ -2.17
MRE11P49959 MIR924-201ENST00000638017 53 ntBASIC1.47□□□□□ -2.17
MRE11P49959 AC008163.1-202ENST00000636004 2889 ntBASIC1.47□□□□□ -2.17
MRE11P49959 Y_RNA.119-201ENST00000363301 96 ntBASIC1.46□□□□□ -2.18
MRE11P49959 SNORA25.8-201ENST00000364831 128 ntBASIC1.46□□□□□ -2.18
MRE11P49959 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
MRE11P49959 MIR4500-201ENST00000579472 76 ntBASIC1.46□□□□□ -2.18
MRE11P49959 SNORD116-10-201ENST00000363791 102 ntBASIC1.45□□□□□ -2.18
MRE11P49959 SNORD113.3-201ENST00000364630 78 ntBASIC1.45□□□□□ -2.18
MRE11P49959 RNU1-36P-201ENST00000365130 165 ntBASIC1.44□□□□□ -2.18
MRE11P49959 Y_RNA.588-201ENST00000391254 102 ntBASIC1.44□□□□□ -2.18
MRE11P49959 SNORD93-201ENST00000408813 74 ntBASIC1.44□□□□□ -2.18
MRE11P49959 RNY4P29-201ENST00000410801 97 ntBASIC1.44□□□□□ -2.18
MRE11P49959 SNRPGP12-201ENST00000449481 213 ntBASIC1.44□□□□□ -2.18
MRE11P49959 MIR4491-201ENST00000581087 68 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms