Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU7-73P-201ENST00000458743 63 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 RNU7-2P-201ENST00000516096 62 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 RNA5SP395-201ENST00000516567 118 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
HOXC13P31276 MIR4668-201ENST00000582284 70 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 AC103810.7-201ENST00000607821 91 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 AC105081.1-201ENST00000617727 106 ntBASIC1.13□□□□□ -2.23
HOXC13P31276 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HOXC13P31276 Y_RNA.96-201ENST00000363092 109 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RNU6-1163P-201ENST00000364516 107 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 Y_RNA.430-201ENST00000384081 110 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 SNORA24-201ENST00000384096 131 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RNU6-813P-201ENST00000384691 107 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RNU6-1237P-201ENST00000384777 107 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 MIR34C-201ENST00000384831 77 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 MIR206-201ENST00000384872 86 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 Y_RNA.611-201ENST00000410682 108 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RNU6-1086P-201ENST00000410930 100 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 Y_RNA.620-201ENST00000411009 88 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 SEPT14P17-201ENST00000617978 177 ntBASIC1.12□□□□□ -2.23
HOXC13P31276 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HOXC13P31276 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
HOXC13P31276 Y_RNA.36-201ENST00000362602 112 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 Y_RNA.448-201ENST00000384185 108 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 Y_RNA.609-201ENST00000410669 89 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
HOXC13P31276 SNORD67.1-201ENST00000516618 108 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 RNU6-1006P-201ENST00000516998 103 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 MIR8055-201ENST00000610739 97 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 AC025521.1-201ENST00000621624 286 ntBASIC1.11□□□□□ -2.23
HOXC13P31276 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HOXC13P31276 SNORD116-10-201ENST00000363791 102 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 SNORD114-24-201ENST00000365029 72 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 RNU6-652P-201ENST00000365488 107 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 Y_RNA.537-201ENST00000384626 109 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 RNU6-1067P-201ENST00000384752 107 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
HOXC13P31276 SPINT5P-201ENST00000448174 155 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 snoU13.16-201ENST00000459350 104 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 RNU7-171P-201ENST00000459581 62 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 MIR4666B-201ENST00000578142 81 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
HOXC13P31276 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HOXC13P31276 SNORD38.1-201ENST00000363863 68 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 Y_RNA.426-201ENST00000384068 113 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 RNU6-1321P-201ENST00000390905 107 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 RNU6-602P-201ENST00000411155 105 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.09□□□□□ -2.23
HOXC13P31276 RNU6-857P-201ENST00000515893 110 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 RNU7-35P-201ENST00000517174 62 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 MIR4439-201ENST00000583746 80 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
HOXC13P31276 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.09□□□□□ -2.23
HOXC13P31276 RNU6-509P-201ENST00000363519 107 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 RNU6-865P-201ENST00000364772 107 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 Y_RNA.567-201ENST00000384736 106 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 MIR520C-201ENST00000385005 87 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 RNU6-279P-201ENST00000391297 101 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 MIR548G-201ENST00000408442 89 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXC13P31276 MTND5P40-201ENST00000559945 246 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 MIR548AO-201ENST00000579992 96 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 MIR4764-201ENST00000580680 88 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 AC020891.4-201ENST00000605745 93 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 RNU6-90P-201ENST00000606352 106 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 AC008133.2-201ENST00000624540 351 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 AC006160.2-201ENST00000637708 154 ntBASIC1.08□□□□□ -2.24
HOXC13P31276 RNU6-1244P-201ENST00000363614 108 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 SNORD115-27-201ENST00000364430 82 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 RNU1-36P-201ENST00000365130 165 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 RNU7-137P-201ENST00000516788 62 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
HOXC13P31276 RNU6-633P-201ENST00000362612 103 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 Y_RNA.374-201ENST00000365606 101 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 MIR181B2-201ENST00000385004 89 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 MIR4251-201ENST00000635819 61 ntBASIC1.06□□□□□ -2.24
HOXC13P31276 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HOXC13P31276 Y_RNA.98-201ENST00000363109 102 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 SNORD114-10-201ENST00000363409 72 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 RNU6-24P-201ENST00000384440 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms