Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.21□□□□□ -2.76
TPM3P06753 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.21□□□□□ -2.76
TPM3P06753 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.22□□□□□ -2.76
TPM3P06753 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.22□□□□□ -2.76
TPM3P06753 RNU6-24P-201ENST00000384440 107 ntBASIC-2.22□□□□□ -2.76
TPM3P06753 AL161932.1-201ENST00000437408 146 ntBASIC-2.22□□□□□ -2.76
TPM3P06753 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.22□□□□□ -2.76
TPM3P06753 AC090574.1-201ENST00000623186 233 ntBASIC-2.22□□□□□ -2.76
TPM3P06753 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 SNORD27-201ENST00000363981 72 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 MIR548F1-201ENST00000408667 84 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 RNA5SP236-201ENST00000516169 116 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 snoR1.1-201ENST00000628177 80 ntBASIC-2.23□□□□□ -2.77
TPM3P06753 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 SNORD116-6-201ENST00000384711 96 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 MIR1302-11-201ENST00000408051 138 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 MIR1302-9-201ENST00000408365 138 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 MIR1302-10-201ENST00000408734 138 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 RNU6-121P-201ENST00000410525 99 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 AC097510.1-201ENST00000510945 133 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 MIR1302-2-201ENST00000607096 138 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 AC084781.2-201ENST00000615568 161 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.24□□□□□ -2.77
TPM3P06753 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RNU6-592P-201ENST00000411333 103 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RNU7-152P-201ENST00000458982 64 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RNU7-164P-201ENST00000459221 62 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 SNORD18.2-201ENST00000459604 70 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RN7SKP19-201ENST00000516016 252 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RNU6-720P-201ENST00000516363 108 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 RNY1P9-201ENST00000532431 109 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 AC021443.1-201ENST00000604478 211 ntBASIC-2.25□□□□□ -2.77
TPM3P06753 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 RNU6-243P-201ENST00000391140 107 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 RNU7-123P-201ENST00000515911 60 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 snoU83B.1-201ENST00000517136 88 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 AC138907.4-201ENST00000570107 226 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 AC084782.3-201ENST00000612282 578 ntBASIC-2.26□□□□□ -2.77
TPM3P06753 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 Y_RNA.52-201ENST00000362760 96 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 MIR34C-201ENST00000384831 77 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 AL121914.1-201ENST00000450188 156 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 RNU6-976P-201ENST00000516086 111 ntBASIC-2.27□□□□□ -2.77
TPM3P06753 SNORD36A-201ENST00000362874 73 ntBASIC-2.28□□□□□ -2.77
TPM3P06753 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.28□□□□□ -2.77
TPM3P06753 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.28□□□□□ -2.77
TPM3P06753 RNU6-616P-201ENST00000384353 107 ntBASIC-2.28□□□□□ -2.77
TPM3P06753 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.28□□□□□ -2.77
TPM3P06753 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.29□□□□□ -2.78
TPM3P06753 SNORD114-4-201ENST00000363962 75 ntBASIC-2.29□□□□□ -2.78
TPM3P06753 RNU4-24P-201ENST00000364565 139 ntBASIC-2.29□□□□□ -2.78
TPM3P06753 RNU6-240P-201ENST00000516098 97 ntBASIC-2.29□□□□□ -2.78
TPM3P06753 AL442663.2-201ENST00000554385 511 ntBASIC-2.29□□□□□ -2.78
TPM3P06753 RNU6-103P-201ENST00000363686 107 ntBASIC-2.3□□□□□ -2.78
TPM3P06753 Y_RNA.294-201ENST00000364916 102 ntBASIC-2.3□□□□□ -2.78
TPM3P06753 SNORD38.2-201ENST00000384470 69 ntBASIC-2.3□□□□□ -2.78
TPM3P06753 AC138393.2-201ENST00000414742 246 ntBASIC-2.3□□□□□ -2.78
TPM3P06753 SNORD2.1-201ENST00000458762 69 ntBASIC-2.3□□□□□ -2.78
TPM3P06753 RNU6-10P-201ENST00000384036 107 ntBASIC-2.31□□□□□ -2.78
TPM3P06753 RNU6-762P-201ENST00000517107 102 ntBASIC-2.31□□□□□ -2.78
TPM3P06753 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.31□□□□□ -2.78
TPM3P06753 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.32□□□□□ -2.78
TPM3P06753 MIR6773-201ENST00000612812 74 ntBASIC-2.32□□□□□ -2.78
TPM3P06753 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.32□□□□□ -2.78
TPM3P06753 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.33□□□□□ -2.78
TPM3P06753 RNU6-957P-201ENST00000363652 99 ntBASIC-2.33□□□□□ -2.78
TPM3P06753 SNORD115-23-201ENST00000364461 82 ntBASIC-2.33□□□□□ -2.78
TPM3P06753 RNY4P3-201ENST00000365254 95 ntBASIC-2.33□□□□□ -2.78
TPM3P06753 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.33□□□□□ -2.78
TPM3P06753 MIR4306-201ENST00000583390 91 ntBASIC-2.33□□□□□ -2.78
TPM3P06753 RNU6-54P-201ENST00000365563 107 ntBASIC-2.34□□□□□ -2.78
TPM3P06753 RNU4-17P-201ENST00000365598 141 ntBASIC-2.34□□□□□ -2.78
TPM3P06753 SNORD101-201ENST00000384027 73 ntBASIC-2.34□□□□□ -2.78
TPM3P06753 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.34□□□□□ -2.78
TPM3P06753 RNU6-588P-201ENST00000410281 105 ntBASIC-2.34□□□□□ -2.78
TPM3P06753 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.35□□□□□ -2.79
TPM3P06753 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.35□□□□□ -2.79
TPM3P06753 Y_RNA.568-201ENST00000384742 113 ntBASIC-2.35□□□□□ -2.79
TPM3P06753 SNORD114-17-201ENST00000364699 75 ntBASIC-2.36□□□□□ -2.79
TPM3P06753 RNU6-277P-201ENST00000516272 106 ntBASIC-2.36□□□□□ -2.79
TPM3P06753 MIR4696-201ENST00000581431 70 ntBASIC-2.36□□□□□ -2.79
TPM3P06753 AL365265.1-201ENST00000621045 234 ntBASIC-2.36□□□□□ -2.79
TPM3P06753 AC073869.6-201ENST00000640656 341 ntBASIC-2.36□□□□□ -2.79
TPM3P06753 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.37□□□□□ -2.79
TPM3P06753 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.37□□□□□ -2.79
TPM3P06753 MIRLET7B-201ENST00000385140 83 ntBASIC-2.37□□□□□ -2.79
TPM3P06753 MIR4744-201ENST00000581563 82 ntBASIC-2.37□□□□□ -2.79
TPM3P06753 RNU6-664P-201ENST00000362381 107 ntBASIC-2.38□□□□□ -2.79
TPM3P06753 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.38□□□□□ -2.79
TPM3P06753 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.38□□□□□ -2.79
TPM3P06753 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms