Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU7-48P-201ENST00000458875 63 ntBASIC0.13□□□□□ -2.39
CSDE1O75534 MIR4500-201ENST00000579472 76 ntBASIC0.13□□□□□ -2.39
CSDE1O75534 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 RNU6-616P-201ENST00000384353 107 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 RNU6-429P-201ENST00000384582 108 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 PCNPP3-201ENST00000393579 471 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 Y_RNA.700-201ENST00000516806 100 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 AC138869.1-201ENST00000568623 124 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 RNU7-10P-201ENST00000607194 63 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
CSDE1O75534 Y_RNA.257-201ENST00000364596 102 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 SNORD116-18-201ENST00000383961 92 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 RNU6-1126P-201ENST00000384002 107 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 RNU7-161P-201ENST00000517289 62 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 IGKV1-22-201ENST00000524313 326 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 Y_RNA.778-201ENST00000620203 90 ntBASIC0.11□□□□□ -2.39
CSDE1O75534 Y_RNA.98-201ENST00000363109 102 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU6-865P-201ENST00000364772 107 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU6-915P-201ENST00000364943 103 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU6-449P-201ENST00000383914 107 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 MT-TI-201ENST00000387365 69 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 snosnR66.1-201ENST00000391095 99 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 MIR513C-201ENST00000401352 84 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 BX276092.1-201ENST00000427368 251 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 AC244505.6-201ENST00000452829 130 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU7-104P-201ENST00000459398 79 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU7-2P-201ENST00000516096 62 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU1-29P-201ENST00000606574 126 ntBASIC0.1□□□□□ -2.39
CSDE1O75534 RNU6-804P-201ENST00000384286 107 ntBASIC0.09□□□□□ -2.4
CSDE1O75534 MIR635-201ENST00000384830 98 ntBASIC0.09□□□□□ -2.4
CSDE1O75534 TRAJ51-201ENST00000504127 63 ntBASIC0.09□□□□□ -2.4
CSDE1O75534 AP001362.1-201ENST00000625165 124 ntBASIC0.09□□□□□ -2.4
CSDE1O75534 Y_RNA.8-201ENST00000362353 102 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.85-201ENST00000363014 111 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 RNU6-726P-201ENST00000364680 107 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.294-201ENST00000364916 102 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.374-201ENST00000365606 101 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.785-201ENST00000384290 109 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.692-201ENST00000516627 105 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 MIR3121-201ENST00000579680 77 ntBASIC0.08□□□□□ -2.4
CSDE1O75534 Y_RNA.221-201ENST00000364248 96 ntBASIC0.07□□□□□ -2.4
CSDE1O75534 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
CSDE1O75534 MIR376B-201ENST00000614515 100 ntBASIC0.07□□□□□ -2.4
CSDE1O75534 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 Y_RNA.127-201ENST00000363386 109 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 Y_RNA.328-201ENST00000365208 113 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 SNORA2A-201ENST00000383885 135 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 RNU6-127P-201ENST00000390897 107 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 RNU6-394P-201ENST00000410735 107 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 RNU7-6P-201ENST00000516845 62 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 Y_RNA.773-201ENST00000607168 90 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 AC087741.2-201ENST00000619415 172 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 AC067863.3-201ENST00000624172 122 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
CSDE1O75534 Y_RNA.114-201ENST00000363265 113 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 RNA5SP403-201ENST00000363598 108 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 Y_RNA.398-201ENST00000383952 99 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 MIR599-201ENST00000385069 95 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 Y_RNA.580-201ENST00000391004 95 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 RNU6-182P-201ENST00000516970 105 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 SNORA70.25-201ENST00000612741 95 ntBASIC0.05□□□□□ -2.4
CSDE1O75534 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 Y_RNA.150-201ENST00000363562 102 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 SNORD115-35-201ENST00000365122 82 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 RNA5SP128-201ENST00000365305 116 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 Y_RNA.420-201ENST00000384043 110 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 MIR34C-201ENST00000384831 77 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 RNA5SP272-201ENST00000516095 111 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 AP001328.1-201ENST00000528550 176 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 MIR3144-201ENST00000579460 79 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 AL162376.1-201ENST00000624117 175 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 AC021753.1-201ENST00000635724 168 ntBASIC0.04□□□□□ -2.4
CSDE1O75534 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 MIR759-201ENST00000390224 91 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RNU6-735P-201ENST00000410612 107 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 AC097635.1-201ENST00000450678 155 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RN7SKP19-201ENST00000516016 252 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 MTND5P41-201ENST00000517498 206 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 MIR3163-201ENST00000581592 73 ntBASIC0.03□□□□□ -2.4
CSDE1O75534 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
CSDE1O75534 Y_RNA.362-201ENST00000365518 110 ntBASIC0.02□□□□□ -2.41
CSDE1O75534 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
CSDE1O75534 RNU6-269P-201ENST00000391077 97 ntBASIC0.02□□□□□ -2.41
CSDE1O75534 RNU7-195P-201ENST00000458793 62 ntBASIC0.02□□□□□ -2.41
CSDE1O75534 RNU6-521P-201ENST00000516663 105 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms