Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 U6.95-201ENST00000636931 70 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 Y_RNA.35-201ENST00000362601 101 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 SNORA63.5-201ENST00000363548 123 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 Y_RNA.247-201ENST00000364500 92 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 RNU4-67P-201ENST00000364569 141 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 RNU6-291P-201ENST00000384720 107 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 MIR759-201ENST00000390224 91 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 AC002350.1-201ENST00000490759 375 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 RNU6-479P-201ENST00000516348 105 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 RNU6-448P-201ENST00000517052 107 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 DEFB131E-201ENST00000532329 154 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 AL670379.3-201ENST00000605040 251 ntBASIC0.51□□□□□ -2.33
HDAC3O15379 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.51□□□□□ -2.33
HDAC3O15379 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
HDAC3O15379 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HDAC3O15379 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
HDAC3O15379 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
HDAC3O15379 Y_RNA.32-201ENST00000362589 110 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-363P-201ENST00000362895 105 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNA5SP245-201ENST00000364239 121 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-429P-201ENST00000384582 108 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-816P-201ENST00000390914 107 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-1268P-201ENST00000391214 107 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-1239P-201ENST00000391310 107 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU2-51P-201ENST00000410708 197 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNA5SP436-201ENST00000516020 115 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-62P-201ENST00000516526 102 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 AL162726.3-218ENST00000636401 95 ntBASIC0.5□□□□□ -2.33
HDAC3O15379 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.5□□□□□ -2.33
HDAC3O15379 RNU6-865P-201ENST00000364772 107 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 BX276092.1-201ENST00000427368 251 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 snoU13.18-201ENST00000459483 104 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 RNU6-313P-201ENST00000516317 112 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 RNU6-1006P-201ENST00000516998 103 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 MIR6129-201ENST00000616087 109 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 AP001362.1-201ENST00000625165 124 ntBASIC0.49□□□□□ -2.33
HDAC3O15379 MIR18A-201ENST00000362310 71 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.85-201ENST00000363014 111 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.98-201ENST00000363109 102 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU4-58P-201ENST00000363192 141 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.118-201ENST00000363300 101 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.155-201ENST00000363632 101 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.360-201ENST00000365512 102 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU6-1144P-201ENST00000384247 104 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 SNORD116-21-201ENST00000384507 92 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU6-535P-201ENST00000384722 107 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU6-476P-201ENST00000384726 107 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 MIR644A-201ENST00000385262 94 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU6-1194P-201ENST00000516208 104 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 SNORA31.14-201ENST00000516728 116 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 Y_RNA.697-201ENST00000516776 113 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 MIR4679-2-201ENST00000578358 77 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 MIR3613-201ENST00000579844 87 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 uc_338.16-201ENST00000621804 95 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.48□□□□□ -2.33
HDAC3O15379 RNU6-1313P-201ENST00000362622 102 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 U8.6-201ENST00000364939 135 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 RNU6-409P-201ENST00000384114 104 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 RNU6-1064P-201ENST00000410626 104 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 AC068339.1-201ENST00000526965 141 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 AP003327.1-201ENST00000529684 127 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 MIR6515-201ENST00000619843 57 ntBASIC0.47□□□□□ -2.33
HDAC3O15379 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
HDAC3O15379 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 RNU6-1201P-201ENST00000384227 107 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 RNU6-880P-201ENST00000384526 107 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 MIR577-201ENST00000385196 96 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 RPL39P34-201ENST00000477141 156 ntBASIC0.46□□□□□ -2.34
HDAC3O15379 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.46□□□□□ -2.34
HDAC3O15379 RNU6-1290P-201ENST00000362957 109 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 Y_RNA.281-201ENST00000364774 94 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 Y_RNA.507-201ENST00000384500 99 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 MIR1912-201ENST00000410389 80 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 SNORA19.1-201ENST00000410656 129 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 TRAJ51-201ENST00000504127 63 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 AL512310.12-203ENST00000640543 90 ntBASIC0.45□□□□□ -2.34
HDAC3O15379 MIR101-2-201ENST00000362195 79 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 RNU6-1107P-201ENST00000364817 104 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 Y_RNA.309-201ENST00000365046 111 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 RNA5SP117-201ENST00000365294 118 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
HDAC3O15379 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 486.5 ms