Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU4-43P-201ENST00000410628 137 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 RNU6-592P-201ENST00000411333 103 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 RNU7-2P-201ENST00000516096 62 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 RNU6-561P-201ENST00000516222 102 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 SNORD116-25-201ENST00000516517 92 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 AL442663.2-201ENST00000554385 511 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 AC245505.1-201ENST00000556398 224 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 MIR376A1-201ENST00000616574 68 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.92□□□□□ -2.72
HMGB3O15347 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.92□□□□□ -2.72
HMGB3O15347 RNU6-326P-201ENST00000365480 107 ntBASIC-1.92□□□□□ -2.72
HMGB3O15347 AC009779.6-201ENST00000603972 165 ntBASIC-1.92□□□□□ -2.72
HMGB3O15347 AL606534.2-204ENST00000635008 178 ntBASIC-1.92□□□□□ -2.72
HMGB3O15347 MIR365A-201ENST00000362260 87 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 SNORA25.1-201ENST00000362326 128 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 RNU6-226P-201ENST00000363778 107 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 SNORD114-17-201ENST00000364699 75 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 AC097510.1-201ENST00000510945 133 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 SNORD58B-201ENST00000607313 66 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 AC025253.1-201ENST00000613623 543 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 snoR1.1-201ENST00000628177 80 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 MIR3688-2-201ENST00000636963 87 ntBASIC-1.93□□□□□ -2.72
HMGB3O15347 RNU6-290P-201ENST00000365212 101 ntBASIC-1.94□□□□□ -2.72
HMGB3O15347 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.94□□□□□ -2.72
HMGB3O15347 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 RNU6-588P-201ENST00000410281 105 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 RNU6-158P-201ENST00000517104 100 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 MIR4441-201ENST00000582623 100 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 AC084781.2-201ENST00000615568 161 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 MIR6129-201ENST00000616087 109 ntBASIC-1.95□□□□□ -2.72
HMGB3O15347 UBE2WP1-201ENST00000362030 340 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 AL161932.1-201ENST00000437408 146 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 AC107027.2-201ENST00000512197 115 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 RNU6-479P-201ENST00000516348 105 ntBASIC-1.96□□□□□ -2.72
HMGB3O15347 SNORD115-23-201ENST00000364461 82 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 SNORD81.2-201ENST00000365153 76 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 RNU1-115P-201ENST00000365329 160 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 MIR8485-201ENST00000401372 91 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 AC021146.9-201ENST00000512503 156 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 AC103591.3-201ENST00000608684 209 ntBASIC-1.97□□□□□ -2.72
HMGB3O15347 SNORD114-4-201ENST00000363962 75 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 RNU6-690P-201ENST00000365242 106 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 SNORD77B-201ENST00000391112 67 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 MIR4760-201ENST00000585040 80 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 AC037487.3-201ENST00000606668 112 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 MIR6773-201ENST00000612812 74 ntBASIC-1.98□□□□□ -2.73
HMGB3O15347 SNORD36A-201ENST00000362874 73 ntBASIC-1.99□□□□□ -2.73
HMGB3O15347 SNORD27-201ENST00000363981 72 ntBASIC-1.99□□□□□ -2.73
HMGB3O15347 RNA5SP331-201ENST00000364986 107 ntBASIC-1.99□□□□□ -2.73
HMGB3O15347 AC104985.2-201ENST00000620598 500 ntBASIC-1.99□□□□□ -2.73
HMGB3O15347 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.80-201ENST00000362996 102 ntBASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.114-201ENST00000363265 113 ntBASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.183-201ENST00000363882 113 ntBASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.485-201ENST00000384395 102 ntBASIC-2□□□□□ -2.73
HMGB3O15347 RNU6-243P-201ENST00000391140 107 ntBASIC-2□□□□□ -2.73
HMGB3O15347 RNA5SP236-201ENST00000516169 116 ntBASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.700-201ENST00000516806 100 ntBASIC-2□□□□□ -2.73
HMGB3O15347 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.01□□□□□ -2.73
HMGB3O15347 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.01□□□□□ -2.73
HMGB3O15347 AC002553.4-201ENST00000616896 331 ntBASIC-2.01□□□□□ -2.73
HMGB3O15347 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 MIR34C-201ENST00000384831 77 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 MIRLET7B-201ENST00000385140 83 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 MTND1P29-201ENST00000448112 647 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 RNU6-559P-201ENST00000516151 98 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.02□□□□□ -2.73
HMGB3O15347 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.02□□□□□ -2.73
HMGB3O15347 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 SNORA62.4-201ENST00000365504 151 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 MIR124-2-201ENST00000385081 109 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 U4.5-201ENST00000617137 123 ntBASIC-2.03□□□□□ -2.73
HMGB3O15347 RNU6-381P-201ENST00000391259 108 ntBASIC-2.04□□□□□ -2.74
HMGB3O15347 RNU6-762P-201ENST00000517107 102 ntBASIC-2.04□□□□□ -2.74
HMGB3O15347 RNU6-957P-201ENST00000363652 99 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 RNU6-54P-201ENST00000365563 107 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 RNU6-616P-201ENST00000384353 107 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 RNU6-337P-201ENST00000391243 106 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms