Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
FOXN3O00409 Y_RNA.107-201ENST00000363190 121 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 RNU6-640P-201ENST00000363693 105 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 RNU6-1335P-201ENST00000365426 107 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 Y_RNA.467-201ENST00000384297 102 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 MT-TF-201ENST00000387314 71 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 MIR1257-201ENST00000408490 117 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 RNY4P30-201ENST00000410216 95 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 SCARNA23-201ENST00000516060 130 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 RNU6-162P-201ENST00000516228 103 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 MIR4500-201ENST00000579472 76 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 AL136317.1-201ENST00000612653 226 ntBASIC1.09□□□□□ -2.23
FOXN3O00409 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
FOXN3O00409 RNU6-1298P-201ENST00000362456 101 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 RNU1-36P-201ENST00000365130 165 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 Y_RNA.544-201ENST00000384650 113 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
FOXN3O00409 RPS26P5-201ENST00000418544 335 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 SPINT5P-201ENST00000448174 155 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 RNU7-185P-201ENST00000459215 60 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 snoU13.18-201ENST00000459483 104 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 RNU6-1006P-201ENST00000516998 103 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 AC020891.4-201ENST00000605745 93 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 AP001362.1-201ENST00000625165 124 ntBASIC1.08□□□□□ -2.24
FOXN3O00409 RNU6-170P-201ENST00000362832 104 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 Y_RNA.98-201ENST00000363109 102 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 Y_RNA.601-201ENST00000410500 113 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 RNU4-83P-201ENST00000410863 133 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 BX276092.1-201ENST00000427368 251 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 AC109327.2-201ENST00000448339 378 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 RNU7-61P-201ENST00000515897 61 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 RNU6-1018P-201ENST00000516577 106 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 RNU6-531P-201ENST00000516694 104 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 MTND5P40-201ENST00000559945 246 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 MIR4491-201ENST00000581087 68 ntBASIC1.07□□□□□ -2.24
FOXN3O00409 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXN3O00409 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
FOXN3O00409 Y_RNA.78-201ENST00000362970 110 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 Y_RNA.119-201ENST00000363301 96 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 MIR488-201ENST00000365739 83 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
FOXN3O00409 MIR520F-201ENST00000384824 87 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 RNU6-644P-201ENST00000391155 98 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 Y_RNA.588-201ENST00000391254 102 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 MIR1827-201ENST00000408549 66 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 RNA5SP255-201ENST00000516370 107 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 RNU6-1110P-201ENST00000516462 101 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 RNA5SP170-201ENST00000517150 101 ntBASIC1.06□□□□□ -2.24
FOXN3O00409 Y_RNA.13-201ENST00000362403 112 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-1131P-201ENST00000364955 107 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 Y_RNA.377-201ENST00000365644 108 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 MIR548G-201ENST00000408442 89 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-447P-201ENST00000410293 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-1118P-201ENST00000410382 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 ACA64.5-201ENST00000516207 127 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 SNORA40.13-201ENST00000516379 120 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 MIR4777-201ENST00000583710 86 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 AC096720.1-201ENST00000604441 183 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 RNU6-86P-201ENST00000606534 107 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
FOXN3O00409 Y_RNA.10-201ENST00000362371 110 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNU6-369P-201ENST00000362515 102 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 Y_RNA.95-201ENST00000363079 95 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 SNORD38.1-201ENST00000363863 68 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 SNORD45B-201ENST00000364617 72 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNY1P2-201ENST00000364820 117 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNY1P7-201ENST00000384743 110 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 MIR4676-201ENST00000583078 72 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 Y_RNA.818-201ENST00000618813 71 ntBASIC1.04□□□□□ -2.24
FOXN3O00409 RNU6-1163P-201ENST00000364516 107 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 AC004941.2-201ENST00000427009 228 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 MTATP8P2-201ENST00000435212 202 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 AC013244.2-201ENST00000603396 103 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
FOXN3O00409 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 RNU6-49P-201ENST00000384256 107 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 MIR520H-201ENST00000385126 88 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 RNU7-156P-201ENST00000517214 74 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 MIR5582-201ENST00000579697 68 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms