Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
RFXAPO00287 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 SNORD36A-201ENST00000362874 73 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RNA5SP48-201ENST00000363969 126 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RNU6-811P-201ENST00000384069 107 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RNU6-42P-201ENST00000384165 107 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RNU6-1165P-201ENST00000410119 107 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RNU7-106P-201ENST00000459514 67 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 SNORA18.5-201ENST00000516616 101 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 SNORA25.16-201ENST00000516741 121 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.11
RFXAPO00287 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RFXAPO00287 MIRLET7F1-201ENST00000362202 87 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RNU6-1094P-201ENST00000362416 104 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RNU6-654P-201ENST00000364373 107 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RNU6-571P-201ENST00000384128 107 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 SNORA72.6-201ENST00000384520 129 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RNU6-322P-201ENST00000516010 103 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 RNA5SP480-201ENST00000516840 109 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 MIR3064-201ENST00000581130 66 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
RFXAPO00287 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RFXAPO00287 Y_RNA.283-201ENST00000364798 112 ntBASIC1.82□□□□□ -2.12
RFXAPO00287 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
RFXAPO00287 RNU6-531P-201ENST00000516694 104 ntBASIC1.82□□□□□ -2.12
RFXAPO00287 RNU6-557P-201ENST00000516842 110 ntBASIC1.82□□□□□ -2.12
RFXAPO00287 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
RFXAPO00287 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
RFXAPO00287 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
RFXAPO00287 RNU6-957P-201ENST00000363652 99 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 RNA5SP325-201ENST00000363756 130 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 RNU6-686P-201ENST00000364839 107 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 RNU1-52P-201ENST00000384190 164 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 MIR520H-201ENST00000385126 88 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RFXAPO00287 RNU7-62P-201ENST00000458856 62 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 RNA5SP102-201ENST00000516865 106 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 RNU6-1015P-201ENST00000517121 99 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 AC104996.3-201ENST00000590718 94 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 AL078603.1-201ENST00000603824 313 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 AC245884.12-201ENST00000615364 59 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 MIR6516-201ENST00000630554 81 ntBASIC1.81□□□□□ -2.12
RFXAPO00287 SNORD114-22-201ENST00000365423 72 ntBASIC1.8□□□□□ -2.12
RFXAPO00287 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RFXAPO00287 MIR1185-1-201ENST00000408598 86 ntBASIC1.8□□□□□ -2.12
RFXAPO00287 AL606490.4-201ENST00000423117 127 ntBASIC1.8□□□□□ -2.12
RFXAPO00287 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
RFXAPO00287 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
RFXAPO00287 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
RFXAPO00287 Y_RNA.588-201ENST00000391254 102 ntBASIC1.79□□□□□ -2.12
RFXAPO00287 snoU13.21-201ENST00000459368 105 ntBASIC1.79□□□□□ -2.12
RFXAPO00287 MIR4536-1-201ENST00000583537 88 ntBASIC1.79□□□□□ -2.12
RFXAPO00287 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.79□□□□□ -2.12
RFXAPO00287 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RFXAPO00287 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RFXAPO00287 RNU1-123P-201ENST00000458950 160 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 RNU6-947P-201ENST00000516264 106 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.78□□□□□ -2.12
RFXAPO00287 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 MIR4529-201ENST00000578110 78 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 MIR4491-201ENST00000581087 68 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 MIR4264-201ENST00000583520 66 ntBASIC1.78□□□□□ -2.12
RFXAPO00287 RNU6-396P-201ENST00000365369 105 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 Y_RNA.491-201ENST00000384417 107 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 RNU6-1254P-201ENST00000391266 104 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RFXAPO00287 SNORD63B-201ENST00000411005 70 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 AL356379.1-201ENST00000414105 126 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 JTBP1-201ENST00000441314 247 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 AC055731.1-201ENST00000474387 401 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 FGF7P7-201ENST00000514120 227 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 RNU2-19P-201ENST00000517288 84 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 AP003716.2-201ENST00000528260 108 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
RFXAPO00287 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RFXAPO00287 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.76□□□□□ -2.13
RFXAPO00287 AC015818.7-201ENST00000428754 109 ntBASIC1.76□□□□□ -2.13
RFXAPO00287 AC015688.6-201ENST00000577737 104 ntBASIC1.76□□□□□ -2.13
RFXAPO00287 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RFXAPO00287 AL157834.3-201ENST00000615543 103 ntBASIC1.76□□□□□ -2.13
RFXAPO00287 RNU6-243P-201ENST00000391140 107 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 snoU13.17-201ENST00000458802 104 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 RNU6-448P-201ENST00000517052 107 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 SNORA77B-201ENST00000578179 125 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
RFXAPO00287 RNU6-53P-201ENST00000365367 106 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNU6-411P-201ENST00000384451 107 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 SNORD77.2-201ENST00000391045 68 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNU7-195P-201ENST00000458793 62 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 TRAJ51-201ENST00000504127 63 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNU6-687P-201ENST00000516443 89 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms