Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC067863.3-201ENST00000624172 122 ntBASIC-0.02□□□□□ -2.41
PDLIM1O00151 RNA5SP325-201ENST00000363756 130 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 RNU6-861P-201ENST00000516745 106 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 RNU7-161P-201ENST00000517289 62 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 MIR5190-201ENST00000581537 80 ntBASIC-0.03□□□□□ -2.41
PDLIM1O00151 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 RNU6-865P-201ENST00000364772 107 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 RNU7-2P-201ENST00000516096 62 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
PDLIM1O00151 RNA5SP457-201ENST00000363657 124 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 MIR599-201ENST00000385069 95 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 BX276092.1-201ENST00000427368 251 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 TRAJ51-201ENST00000504127 63 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 RNY4P20-201ENST00000516678 93 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 RNU6-388P-201ENST00000517012 105 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 RNU6-389P-201ENST00000517048 105 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 AL109933.3-201ENST00000619095 188 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 AP001362.1-201ENST00000625165 124 ntBASIC-0.05□□□□□ -2.42
PDLIM1O00151 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.06□□□□□ -2.42
PDLIM1O00151 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNU6-379P-201ENST00000363813 104 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNU6-200P-201ENST00000364743 107 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNU4-11P-201ENST00000365287 132 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNU6-616P-201ENST00000384353 107 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 MIR593-201ENST00000384856 100 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 AC108059.2-201ENST00000434626 151 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 AC108081.1-201ENST00000604358 221 ntBASIC-0.06□□□□□ -2.42
PDLIM1O00151 RNA5SP403-201ENST00000363598 108 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 RNU6-652P-201ENST00000365488 107 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 RNU6-449P-201ENST00000383914 107 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 RNU7-120P-201ENST00000459334 63 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 AL162376.1-201ENST00000624117 175 ntBASIC-0.07□□□□□ -2.42
PDLIM1O00151 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 RNU6-151P-201ENST00000364158 107 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 SNORD115-35-201ENST00000365122 82 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
PDLIM1O00151 MIR548I2-201ENST00000408348 149 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 RNU6-138P-201ENST00000515952 107 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 RNU7-6P-201ENST00000516845 62 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
PDLIM1O00151 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 MIR892B-201ENST00000401279 77 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 AC097635.1-201ENST00000450678 155 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 RNU6-782P-201ENST00000516852 104 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 RNU1-29P-201ENST00000606574 126 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 SNORA70.25-201ENST00000612741 95 ntBASIC-0.09□□□□□ -2.42
PDLIM1O00151 RNU6-682P-201ENST00000363843 106 ntBASIC-0.1□□□□□ -2.43
PDLIM1O00151 SNORD41.1-201ENST00000391000 69 ntBASIC-0.1□□□□□ -2.43
PDLIM1O00151 RNU6-269P-201ENST00000391077 97 ntBASIC-0.1□□□□□ -2.43
PDLIM1O00151 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.1□□□□□ -2.43
PDLIM1O00151 MIR376B-201ENST00000614515 100 ntBASIC-0.1□□□□□ -2.43
PDLIM1O00151 RNU6-460P-201ENST00000391158 108 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 AC141557.1-201ENST00000540982 400 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 AC021753.1-201ENST00000635724 168 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 AC073869.9-201ENST00000641610 120 ntBASIC-0.11□□□□□ -2.43
PDLIM1O00151 MIR759-201ENST00000390224 91 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 MIR513C-201ENST00000401352 84 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 SNORD63B-201ENST00000411005 70 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 RNU7-195P-201ENST00000458793 62 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 SNORA81.3-201ENST00000517283 198 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 MIR3121-201ENST00000579680 77 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 MIR4743-201ENST00000584576 69 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.12□□□□□ -2.43
PDLIM1O00151 RNU6-170P-201ENST00000362832 104 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 RNU6-915P-201ENST00000364943 103 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 MT-TG-201ENST00000387429 68 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 MIR501-201ENST00000390204 84 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 AC074198.2-201ENST00000508153 258 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 AC004792.1-201ENST00000614523 137 ntBASIC-0.13□□□□□ -2.43
PDLIM1O00151 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.13□□□□□ -2.43
PDLIM1O00151 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.14□□□□□ -2.43
PDLIM1O00151 SNORD110-201ENST00000408189 75 ntBASIC-0.14□□□□□ -2.43
PDLIM1O00151 MIR3163-201ENST00000581592 73 ntBASIC-0.14□□□□□ -2.43
PDLIM1O00151 AC087741.2-201ENST00000619415 172 ntBASIC-0.14□□□□□ -2.43
PDLIM1O00151 RNU6-509P-201ENST00000363519 107 ntBASIC-0.15□□□□□ -2.43
PDLIM1O00151 RNU6-571P-201ENST00000384128 107 ntBASIC-0.15□□□□□ -2.43
PDLIM1O00151 SNORD38.2-201ENST00000384470 69 ntBASIC-0.15□□□□□ -2.43
PDLIM1O00151 AC006210.1-201ENST00000424882 111 ntBASIC-0.15□□□□□ -2.43
PDLIM1O00151 RNU7-197P-201ENST00000458836 62 ntBASIC-0.15□□□□□ -2.43
PDLIM1O00151 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 266.1 ms