Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR4491-201ENST00000581087 68 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.567-201ENST00000384736 106 ntBASIC1.84□□□□□ -2.11
TMEM88BA6NKF7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TMEM88BA6NKF7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.84□□□□□ -2.11
TMEM88BA6NKF7 AC012531.4-201ENST00000616509 177 ntBASIC1.84□□□□□ -2.11
TMEM88BA6NKF7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
TMEM88BA6NKF7 MIR1-1-201ENST00000362147 71 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 Y_RNA.43-201ENST00000362670 111 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 RNU6-480P-201ENST00000384332 107 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 RNU6-813P-201ENST00000384691 107 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 MIR520E-201ENST00000384867 87 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 AC090897.1-201ENST00000580909 226 ntBASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TMEM88BA6NKF7 RNU6-640P-201ENST00000363693 105 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 MIR125B2-201ENST00000385128 89 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 AC109327.2-201ENST00000448339 378 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 RPS29P1-201ENST00000465274 159 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 AL136317.1-201ENST00000612653 226 ntBASIC1.82□□□□□ -2.12
TMEM88BA6NKF7 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 Y_RNA.247-201ENST00000364500 92 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 RNU6-571P-201ENST00000384128 107 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 RNU6-364P-201ENST00000384387 107 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 MIR100-201ENST00000385259 80 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 RNU6-887P-201ENST00000410660 100 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 RNU7-10P-201ENST00000607194 63 ntBASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
TMEM88BA6NKF7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 RPS29P23-201ENST00000458635 123 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 snoU13.21-201ENST00000459368 105 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 RNU7-40P-201ENST00000516397 64 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 RNU6-977P-201ENST00000516411 103 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 RNU6-765P-201ENST00000516916 99 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 MIR151B-201ENST00000584249 96 ntBASIC1.8□□□□□ -2.12
TMEM88BA6NKF7 RNA5SP327-201ENST00000362494 101 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 SNORA25.8-201ENST00000364831 128 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 MIR938-201ENST00000401216 83 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 FABP5P4-201ENST00000437203 171 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 AC002429.1-201ENST00000437672 148 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 RNU7-61P-201ENST00000515897 61 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 MIR4777-201ENST00000583710 86 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 AC006254.2-201ENST00000603259 279 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 MIR6788-201ENST00000618842 66 ntBASIC1.79□□□□□ -2.12
TMEM88BA6NKF7 RNU6-1298P-201ENST00000362456 101 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 RNU7-156P-201ENST00000517214 74 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 MIR4676-201ENST00000583078 72 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 RNU6-86P-201ENST00000606534 107 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 AC091304.10-201ENST00000641554 121 ntBASIC1.78□□□□□ -2.12
TMEM88BA6NKF7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
TMEM88BA6NKF7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 RNU6-1163P-201ENST00000364516 107 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.369-201ENST00000365568 117 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 SNORD26-201ENST00000384147 75 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 RNU6-644P-201ENST00000391155 98 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 RNU6-531P-201ENST00000516694 104 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 MALAT1.1-201ENST00000618249 95 ntBASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TMEM88BA6NKF7 SNORA25.16-201ENST00000516741 121 ntBASIC1.76□□□□□ -2.13
TMEM88BA6NKF7 RNU6-1255P-201ENST00000363434 112 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 SNORD116-10-201ENST00000363791 102 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.467-201ENST00000384297 102 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 MIR200A-201ENST00000384875 90 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 MIR548J-201ENST00000408833 112 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 AL354695.1-201ENST00000427935 228 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 MIR5582-201ENST00000579697 68 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 MIR548H5-201ENST00000580314 60 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 AC027335.2-201ENST00000624030 375 ntBASIC1.75□□□□□ -2.13
TMEM88BA6NKF7 RNU6-1244P-201ENST00000363614 108 ntBASIC1.74□□□□□ -2.13
TMEM88BA6NKF7 RNU1-119P-201ENST00000391122 165 ntBASIC1.74□□□□□ -2.13
TMEM88BA6NKF7 SNRPGP12-201ENST00000449481 213 ntBASIC1.74□□□□□ -2.13
TMEM88BA6NKF7 MIR8066-201ENST00000617280 78 ntBASIC1.74□□□□□ -2.13
TMEM88BA6NKF7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.342-201ENST00000365352 113 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 AC019288.1-201ENST00000557918 224 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 SNORD92-201ENST00000585078 85 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 AC020891.4-201ENST00000605745 93 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 U7.3-201ENST00000616123 62 ntBASIC1.73□□□□□ -2.13
TMEM88BA6NKF7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.72□□□□□ -2.13
TMEM88BA6NKF7 MIR19B1-201ENST00000384829 87 ntBASIC1.72□□□□□ -2.13
TMEM88BA6NKF7 MIR1827-201ENST00000408549 66 ntBASIC1.72□□□□□ -2.13
TMEM88BA6NKF7 BX276092.1-201ENST00000427368 251 ntBASIC1.72□□□□□ -2.13
TMEM88BA6NKF7 RNU6-850P-201ENST00000516934 103 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms