Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
PPARGC1AQ9UBK2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PPARGC1AQ9UBK2 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.369-201ENST00000365568 117 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 MIR548G-201ENST00000408442 89 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 AC138749.4-201ENST00000563970 127 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-90P-201ENST00000606352 106 ntBASIC1.5□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-53P-201ENST00000365367 106 ntBASIC1.49□□□□□ -2.17
PPARGC1AQ9UBK2 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
PPARGC1AQ9UBK2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.49□□□□□ -2.17
PPARGC1AQ9UBK2 AC019288.1-201ENST00000557918 224 ntBASIC1.49□□□□□ -2.17
PPARGC1AQ9UBK2 AC012531.4-201ENST00000616509 177 ntBASIC1.49□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.247-201ENST00000364500 92 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 RNU1-36P-201ENST00000365130 165 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 MIR1257-201ENST00000408490 117 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 MIR4777-201ENST00000583710 86 ntBASIC1.48□□□□□ -2.17
PPARGC1AQ9UBK2 RNA5SP133-201ENST00000363368 119 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-934P-201ENST00000365154 107 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-972P-201ENST00000391208 107 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 SNORD93-201ENST00000408813 74 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU7-185P-201ENST00000459215 60 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-795P-201ENST00000516323 103 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 U6.109-201ENST00000636749 87 ntBASIC1.47□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-1255P-201ENST00000363434 112 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-813P-201ENST00000384691 107 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 MIR5582-201ENST00000579697 68 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 MIR4491-201ENST00000581087 68 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 AC091304.10-201ENST00000641554 121 ntBASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PPARGC1AQ9UBK2 AC023934.1-201ENST00000574529 2389 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 ZNF209P-201ENST00000593450 2304 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNU4-58P-201ENST00000363192 141 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-571P-201ENST00000384128 107 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 Y_RNA.567-201ENST00000384736 106 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNY4P30-201ENST00000410216 95 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-887P-201ENST00000410660 100 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 MTND5P40-201ENST00000559945 246 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 MALAT1.1-201ENST00000618249 95 ntBASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PPARGC1AQ9UBK2 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 Y_RNA.342-201ENST00000365352 113 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-939P-201ENST00000384634 107 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RPS26P5-201ENST00000418544 335 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 SPINT5P-201ENST00000448174 155 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 AC109327.2-201ENST00000448339 378 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 SNRPGP12-201ENST00000449481 213 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RNU7-61P-201ENST00000515897 61 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-765P-201ENST00000516916 99 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 AC090897.1-201ENST00000580909 226 ntBASIC1.44□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-1244P-201ENST00000363614 108 ntBASIC1.43□□□□□ -2.18
PPARGC1AQ9UBK2 SNORA25-201ENST00000384384 134 ntBASIC1.43□□□□□ -2.18
PPARGC1AQ9UBK2 SNORD83.1-201ENST00000411362 77 ntBASIC1.43□□□□□ -2.18
PPARGC1AQ9UBK2 RNU7-95P-201ENST00000459222 64 ntBASIC1.43□□□□□ -2.18
PPARGC1AQ9UBK2 AC023827.1-201ENST00000569247 97 ntBASIC1.43□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-1125P-201ENST00000363601 107 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-480P-201ENST00000384332 107 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 MIR125B2-201ENST00000385128 89 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-644P-201ENST00000391155 98 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-994P-201ENST00000410507 111 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 RNU4-83P-201ENST00000410863 133 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 snoU13.21-201ENST00000459368 105 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 MIR4498-201ENST00000577599 66 ntBASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
PPARGC1AQ9UBK2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 MIR337-201ENST00000362281 93 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 SNORD116-10-201ENST00000363791 102 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 MIR488-201ENST00000365739 83 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.41□□□□□ -2.18
PPARGC1AQ9UBK2 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms