Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RNU6-704P-201ENST00000364162 103 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-647P-201ENST00000364243 107 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 SNORD58C-201ENST00000365223 64 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-364P-201ENST00000384387 107 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 TUG1_4.1-201ENST00000619464 181 ntBASIC0.69□□□□□ -2.3
ECHDC1Q9NTX5 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 RNU7-6P-201ENST00000516845 62 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 MTND5P34-201ENST00000568888 325 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 AC090897.1-201ENST00000580909 226 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 AL136317.1-201ENST00000612653 226 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 MIR6082-201ENST00000613604 109 ntBASIC0.68□□□□□ -2.3
ECHDC1Q9NTX5 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 Y_RNA.528-201ENST00000384575 108 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 MIR206-201ENST00000384872 86 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 MIR936-201ENST00000401264 98 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-447P-201ENST00000410293 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-355P-201ENST00000410427 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-791P-201ENST00000410467 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-705P-201ENST00000410601 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-860P-201ENST00000410860 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-785P-201ENST00000411324 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-772P-201ENST00000516042 105 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-1061P-201ENST00000516530 99 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNU6-531P-201ENST00000516694 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 U6.90-201ENST00000614007 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 U6.70-201ENST00000620287 104 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 MIR1255B1-201ENST00000636325 63 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 U6.109-201ENST00000636749 87 ntBASIC0.67□□□□□ -2.3
ECHDC1Q9NTX5 RNA5SP133-201ENST00000363368 119 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 SNORD50.2-201ENST00000365465 70 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 SNORA72.6-201ENST00000384520 129 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 MIR548M-201ENST00000408260 86 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 RPL39P25-201ENST00000449384 154 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 AC002350.1-201ENST00000490759 375 ntBASIC0.66□□□□□ -2.3
ECHDC1Q9NTX5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.71-201ENST00000362892 104 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 SNORD114-10-201ENST00000363409 72 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.198-201ENST00000364013 98 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 AC025166.1-201ENST00000612411 163 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 MTND5P18-201ENST00000445624 1801 ntBASIC0.65□□□□□ -2.31
ECHDC1Q9NTX5 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
ECHDC1Q9NTX5 SNORD114-23-201ENST00000363536 72 ntBASIC0.64□□□□□ -2.31
ECHDC1Q9NTX5 RNA5SP245-201ENST00000364239 121 ntBASIC0.64□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 SNORD100-201ENST00000408573 76 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 RNA5SP136-201ENST00000410906 107 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-659P-201ENST00000516454 104 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-448P-201ENST00000517052 107 ntBASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ECHDC1Q9NTX5 RNY1P2-201ENST00000364820 117 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-291P-201ENST00000384720 107 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 MIR644A-201ENST00000385262 94 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 AL353813.1-201ENST00000440700 253 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 RNU7-2P-201ENST00000516096 62 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
ECHDC1Q9NTX5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 SNORD115-19-201ENST00000363098 82 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 SNORD115-18-201ENST00000363293 82 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 SNORD115-17-201ENST00000364612 82 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 Y_RNA.261-201ENST00000364631 102 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 SNORD115-35-201ENST00000365122 82 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-80P-201ENST00000384195 107 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 MIR376B-201ENST00000614515 100 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 uc_338.16-201ENST00000621804 95 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
ECHDC1Q9NTX5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 AL157777.2-201ENST00000258070 137 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 MIR539-201ENST00000365690 78 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 RNU7-48P-201ENST00000458875 63 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 RNU6-521P-201ENST00000516663 105 ntBASIC0.6□□□□□ -2.31
ECHDC1Q9NTX5 DEFB131E-201ENST00000532329 154 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms