Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 uc_338.10-201ENST00000621872 182 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 AP001362.1-201ENST00000625165 124 ntBASIC-0.65□□□□□ -2.51
VCX3AQ9NNX9 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 YWHAEP2-201ENST00000580066 112 ntBASIC-0.66□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 MIR617-201ENST00000385030 97 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 RNU6-175P-201ENST00000516896 107 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.67□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 RNU6-643P-201ENST00000384018 107 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 RNU6-578P-201ENST00000390980 103 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 RNU4-69P-201ENST00000410677 143 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 MIR8064-201ENST00000612863 90 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 AL109933.3-201ENST00000619095 188 ntBASIC-0.68□□□□□ -2.52
VCX3AQ9NNX9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 RNU6-923P-201ENST00000364753 107 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 RNU6-47P-201ENST00000383866 107 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 RNU6-988P-201ENST00000519081 107 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 AL391099.1-201ENST00000624635 187 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 AC093726.3-201ENST00000637588 150 ntBASIC-0.69□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 SNORD115-44-201ENST00000365391 82 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU6-240P-201ENST00000516098 97 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 MIR4460-201ENST00000577862 86 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 AC021443.1-201ENST00000604478 211 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 AC011603.4-201ENST00000611325 277 ntBASIC-0.7□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 SNORD77B-201ENST00000391112 67 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 MIR2113-201ENST00000459007 91 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 RNU7-106P-201ENST00000459514 67 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 AC138907.4-201ENST00000570107 226 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 RNU2-4P-201ENST00000606190 192 ntBASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.71□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 SNORA51.5-201ENST00000384126 131 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 RNU6-474P-201ENST00000384243 107 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 RNU6-472P-201ENST00000384299 107 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 MTND5P20-201ENST00000448677 143 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 RNU7-164P-201ENST00000459221 62 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 MIR4680-201ENST00000580906 66 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 MIR376B-201ENST00000614515 100 ntBASIC-0.72□□□□□ -2.52
VCX3AQ9NNX9 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 MT-TD-201ENST00000387419 68 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 MTND4LP11-201ENST00000422184 280 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 RPS29P8-201ENST00000445109 171 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 MIR4436A-201ENST00000585278 85 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 AC009779.6-201ENST00000603972 165 ntBASIC-0.73□□□□□ -2.53
VCX3AQ9NNX9 MIR335-201ENST00000362173 94 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 AL445193.1-201ENST00000441183 141 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 RNU6-850P-201ENST00000516934 103 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.74□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 RNA5SP457-201ENST00000363657 124 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 SNORD56B-201ENST00000384713 71 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 MT-TY-201ENST00000387409 66 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 AC087741.2-201ENST00000619415 172 ntBASIC-0.75□□□□□ -2.53
VCX3AQ9NNX9 MIR20A-201ENST00000362279 71 ntBASIC-0.76□□□□□ -2.53
VCX3AQ9NNX9 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms