Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Z96811.1-201ENST00000445880 108 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 RNU7-26P-201ENST00000458980 63 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 RNA5SP220-201ENST00000516298 104 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 RNA5SP481-201ENST00000516814 122 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 RNU2-19P-201ENST00000517288 84 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 MIR3140-201ENST00000583685 90 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 AL078603.1-201ENST00000603824 313 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 BX248123.2-201ENST00000606318 124 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 MIR6740-201ENST00000618268 113 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 Y_RNA.239-201ENST00000364444 113 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 SNORA48.1-201ENST00000390879 135 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 AP1B1P2-201ENST00000416196 106 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 U6.81-201ENST00000612550 106 ntBASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL25A1Q9BXS0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 RNU6-829P-201ENST00000363700 112 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 Y_RNA.236-201ENST00000364427 111 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 RPS27P16-201ENST00000425758 201 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 AC097510.1-201ENST00000510945 133 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 RNU11-2P-201ENST00000516898 142 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 MIR5089-201ENST00000580047 84 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 AC069503.3-201ENST00000618674 145 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 MIR219B-201ENST00000637023 88 ntBASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.49□□□□□ -2.01
COL25A1Q9BXS0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 SNORA40.6-201ENST00000391153 128 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 HMGN2P35-201ENST00000412164 270 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 AL606490.4-201ENST00000423117 127 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 AC104389.3-201ENST00000445629 235 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 RNU6-531P-201ENST00000516694 104 ntBASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL25A1Q9BXS0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 RNU6-824P-201ENST00000363724 104 ntBASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 MIR4696-201ENST00000581431 70 ntBASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 TRDV1-202ENST00000621643 102 ntBASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.47□□□□□ -2.01
COL25A1Q9BXS0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
COL25A1Q9BXS0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU6-664P-201ENST00000362381 107 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 SNORA24B-201ENST00000384176 131 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 MIR627-201ENST00000384979 97 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU6-604P-201ENST00000390917 100 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 MIR1302-7-201ENST00000408841 72 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU7-195P-201ENST00000458793 62 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RN7SL75P-201ENST00000461926 281 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU1-143P-201ENST00000516296 146 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNA5SP61-201ENST00000516453 100 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 U1.23-201ENST00000610293 146 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 RNU1-68P-201ENST00000615382 146 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 AL109933.3-201ENST00000619095 188 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 U1.39-201ENST00000621562 146 ntBASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
COL25A1Q9BXS0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 RNU4-58P-201ENST00000363192 141 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 RNA5SP48-201ENST00000363969 126 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 MIR519A1-201ENST00000385257 85 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 MIR653-201ENST00000385279 96 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 RNA5SP465-201ENST00000391195 109 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 TRAJ51-201ENST00000504127 63 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 SNORA25.16-201ENST00000516741 121 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 MIR4452-201ENST00000583004 71 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.45□□□□□ -2.02
COL25A1Q9BXS0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 RNU1-148P-201ENST00000384472 162 ntBASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 MIR583-201ENST00000384846 75 ntBASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 RNA5SP137-201ENST00000516833 135 ntBASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 MIR4491-201ENST00000581087 68 ntBASIC2.44□□□□□ -2.02
COL25A1Q9BXS0 Y_RNA.30-201ENST00000362572 97 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 RNU6-1187P-201ENST00000364771 110 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 SNORD101-201ENST00000384027 73 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 SNORA46-201ENST00000384762 135 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 MT-TF-201ENST00000387314 71 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 SNORD100-201ENST00000408573 76 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 RNU4-62P-201ENST00000410125 130 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 MIR4264-201ENST00000583520 66 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 MTRNR2L2-201ENST00000604882 87 ntBASIC2.43□□□□□ -2.02
COL25A1Q9BXS0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
COL25A1Q9BXS0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms