Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MIR548BB-201ENST00000626714 66 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.191-201ENST00000363972 113 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.437-201ENST00000384113 113 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 RNU6-571P-201ENST00000384128 107 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 MIR934-201ENST00000401241 83 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRIM56Q9BRZ2 SNRPGP12-201ENST00000449481 213 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
TRIM56Q9BRZ2 MIR6516-201ENST00000630554 81 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 AC006160.2-201ENST00000637708 154 ntBASIC2□□□□□ -2.09
TRIM56Q9BRZ2 RNA5SP264-201ENST00000363115 107 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 RNA5SP133-201ENST00000363368 119 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 RNA5SP225-201ENST00000410874 135 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 snoU13.25-201ENST00000458945 104 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 AC019176.1-201ENST00000518519 225 ntBASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM56Q9BRZ2 AC008163.1-202ENST00000636004 2889 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 RNU6-53P-201ENST00000365367 106 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 MIR1185-1-201ENST00000408598 86 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 RNU6-519P-201ENST00000410590 108 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 AL512310.8-201ENST00000550183 120 ntBASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.97□□□□□ -2.09
TRIM56Q9BRZ2 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
TRIM56Q9BRZ2 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
TRIM56Q9BRZ2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM56Q9BRZ2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM56Q9BRZ2 SNORD115-37-201ENST00000363768 82 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-787P-201ENST00000384032 107 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 MIR519C-201ENST00000385053 87 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-279P-201ENST00000391297 101 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 MIR18B-201ENST00000454574 71 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 RNA5SP395-201ENST00000516567 118 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-850P-201ENST00000516934 103 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 AC020891.4-201ENST00000605745 93 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 AL512598.1-201ENST00000610158 273 ntBASIC1.96□□□□□ -2.1
TRIM56Q9BRZ2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM56Q9BRZ2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 Y_RNA.313-201ENST00000365095 103 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-580P-201ENST00000365159 107 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 BX276092.1-201ENST00000427368 251 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-165P-201ENST00000517170 99 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-902P-201ENST00000517212 91 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.93□□□□□ -2.1
TRIM56Q9BRZ2 RNU4-58P-201ENST00000363192 141 ntBASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-654P-201ENST00000364373 107 ntBASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 RNU4-83P-201ENST00000410863 133 ntBASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 AC093729.1-201ENST00000513074 128 ntBASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM56Q9BRZ2 SNORD115-27-201ENST00000364430 82 ntBASIC1.91□□□□□ -2.1
TRIM56Q9BRZ2 SNORD93-201ENST00000408813 74 ntBASIC1.91□□□□□ -2.1
TRIM56Q9BRZ2 RPS27P16-201ENST00000425758 201 ntBASIC1.91□□□□□ -2.1
TRIM56Q9BRZ2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.91□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
TRIM56Q9BRZ2 RNU6-652P-201ENST00000365488 107 ntBASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 MIR1236-201ENST00000408340 102 ntBASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 AC087499.7-201ENST00000441958 109 ntBASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-857P-201ENST00000515893 110 ntBASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 uc_338.6-201ENST00000613544 171 ntBASIC1.9□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-524P-201ENST00000384270 107 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-24P-201ENST00000384440 107 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 SNORA72.6-201ENST00000384520 129 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 RNA5SP95-201ENST00000410319 137 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 RN7SKP88-201ENST00000516847 250 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 MIR4491-201ENST00000581087 68 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 7SK.8-201ENST00000612110 250 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 7SK.11-201ENST00000615477 250 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 7SK.13-201ENST00000622040 250 ntBASIC1.89□□□□□ -2.11
TRIM56Q9BRZ2 AL161722.3-201ENST00000605789 2983 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.244-201ENST00000364484 109 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 RNU1-36P-201ENST00000365130 165 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 RNA5SP247-201ENST00000411181 105 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 SNORD4B-201ENST00000459083 72 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms