Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 RNU4-83P-201ENST00000410863 133 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 AC096949.1-201ENST00000412047 152 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 SUMO1P3-201ENST00000439961 304 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
CLSTN3Q9BQT9 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 MIR573-201ENST00000384964 99 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 MT-TI-201ENST00000387365 69 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 SNORD77B-201ENST00000391112 67 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 RNA5SP136-201ENST00000410906 107 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CLSTN3Q9BQT9 MIR759-201ENST00000390224 91 ntBASIC0.76□□□□□ -2.29
CLSTN3Q9BQT9 RNU7-102P-201ENST00000458948 62 ntBASIC0.76□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-1061P-201ENST00000516530 99 ntBASIC0.76□□□□□ -2.29
CLSTN3Q9BQT9 SNORD67.1-201ENST00000516618 108 ntBASIC0.76□□□□□ -2.29
CLSTN3Q9BQT9 AL359881.1-201ENST00000602916 267 ntBASIC0.76□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 SNORD58C-201ENST00000365223 64 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.528-201ENST00000384575 108 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 AC244098.3-201ENST00000424803 96 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 RNU7-137P-201ENST00000516788 62 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-765P-201ENST00000516916 99 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 AC090897.1-201ENST00000580909 226 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 MIR4491-201ENST00000581087 68 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-403P-201ENST00000363163 104 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 SNORD114-10-201ENST00000363409 72 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 RNU7-6P-201ENST00000516845 62 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 AP003327.1-201ENST00000529684 127 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 AC008608.1-201ENST00000603910 127 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 AC025166.1-201ENST00000612411 163 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 MIR8066-201ENST00000617280 78 ntBASIC0.74□□□□□ -2.29
CLSTN3Q9BQT9 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.218-201ENST00000364218 104 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 RNU7-107P-201ENST00000459121 61 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-772P-201ENST00000516042 105 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-1234P-201ENST00000516877 103 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-448P-201ENST00000517052 107 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 AC087741.2-201ENST00000619415 172 ntBASIC0.73□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 RNA5SP117-201ENST00000365294 118 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 RNU6-80P-201ENST00000384195 107 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 RNA5SP222-201ENST00000411039 105 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 MIR3163-201ENST00000581592 73 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 MIR6082-201ENST00000613604 109 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 AC105081.1-201ENST00000617727 106 ntBASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CLSTN3Q9BQT9 Y_RNA.71-201ENST00000362892 104 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-616P-201ENST00000384353 107 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 AL603908.1-201ENST00000406098 201 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-735P-201ENST00000410612 107 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 MIR3612-201ENST00000579753 87 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 MTND5P18-201ENST00000445624 1801 ntBASIC0.71□□□□□ -2.3
CLSTN3Q9BQT9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 RNU4-58P-201ENST00000363192 141 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 MIR206-201ENST00000384872 86 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 TMSB4XP3-201ENST00000445144 114 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 AC002350.1-201ENST00000490759 375 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 SNORA25.16-201ENST00000516741 121 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 RNA5SP330-201ENST00000517096 96 ntBASIC0.7□□□□□ -2.3
CLSTN3Q9BQT9 AL157777.2-201ENST00000258070 137 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 RNA5SP133-201ENST00000363368 119 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-81P-201ENST00000365608 104 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 MIR4711-201ENST00000578274 70 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 U6.109-201ENST00000636749 87 ntBASIC0.69□□□□□ -2.3
CLSTN3Q9BQT9 SNORD115-19-201ENST00000363098 82 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 SNORD115-18-201ENST00000363293 82 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 SNORD115-17-201ENST00000364612 82 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-659P-201ENST00000516454 104 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 330.4 ms