Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 SNORA75.5-201ENST00000391291 81 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNA5SP395-201ENST00000516567 118 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNU6-111P-201ENST00000517179 105 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 MIR4676-201ENST00000583078 72 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 MIR101-2-201ENST00000362195 79 ntBASIC0.19□□□□□ -2.38
SCN2AQ99250 Y_RNA.188-201ENST00000363952 111 ntBASIC0.19□□□□□ -2.38
SCN2AQ99250 RNU6-449P-201ENST00000383914 107 ntBASIC0.19□□□□□ -2.38
SCN2AQ99250 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.19□□□□□ -2.38
SCN2AQ99250 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
SCN2AQ99250 SNORA22.1-201ENST00000362701 134 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 RNU6-312P-201ENST00000364629 107 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 Y_RNA.785-201ENST00000384290 109 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 SNORD28-201ENST00000384706 75 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 RNU6-240P-201ENST00000516098 97 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 MIR3121-201ENST00000579680 77 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 AC098479.1-201ENST00000609225 154 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 AL137067.1-201ENST00000615933 120 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 Y_RNA.362-201ENST00000365518 110 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 MIR588-201ENST00000384900 83 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 Y_RNA.793-201ENST00000411222 111 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 RNU7-48P-201ENST00000458875 63 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 RNY4P20-201ENST00000516678 93 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 AC022559.1-201ENST00000520905 205 ntBASIC0.18□□□□□ -2.38
SCN2AQ99250 Y_RNA.171-201ENST00000363760 102 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 RNA5SP517-201ENST00000364724 117 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 Y_RNA.297-201ENST00000364950 91 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 SNORA2A-201ENST00000383885 135 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 Y_RNA.401-201ENST00000383965 117 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 RNU6-35P-201ENST00000384530 107 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 AL603914.1-201ENST00000401964 204 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 RN7SKP19-201ENST00000516016 252 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 AC104408.1-201ENST00000605241 170 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 MIR6086-201ENST00000638065 55 ntBASIC0.17□□□□□ -2.38
SCN2AQ99250 MIR513C-201ENST00000401352 84 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 RNU6-1219P-201ENST00000516143 112 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 RNU7-161P-201ENST00000517289 62 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 MIR4503-201ENST00000582187 83 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 Y_RNA.13-201ENST00000362403 112 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 RNU6-978P-201ENST00000364371 103 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 SNORA25.7-201ENST00000364375 127 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 SNORA72.6-201ENST00000384520 129 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 MIR635-201ENST00000384830 98 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 SNORA25.16-201ENST00000516741 121 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 DEFB131E-201ENST00000532329 154 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 AC105081.1-201ENST00000617727 106 ntBASIC0.16□□□□□ -2.38
SCN2AQ99250 RNU6-682P-201ENST00000363843 106 ntBASIC0.15□□□□□ -2.39
SCN2AQ99250 MIR548L-201ENST00000408303 86 ntBASIC0.15□□□□□ -2.39
SCN2AQ99250 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
SCN2AQ99250 MIR4636-201ENST00000582271 80 ntBASIC0.15□□□□□ -2.39
SCN2AQ99250 SNRPGP12-201ENST00000449481 213 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 MIR3658-201ENST00000636291 56 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 AC099654.10-201ENST00000640395 161 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU6-848P-201ENST00000515948 107 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU6-617P-201ENST00000516147 107 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU6-473P-201ENST00000516164 107 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU6-1049P-201ENST00000516414 107 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNA5SP285-201ENST00000516619 119 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU6-531P-201ENST00000516694 104 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 MIR548H5-201ENST00000580314 60 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 RNU7-10P-201ENST00000607194 63 ntBASIC0.14□□□□□ -2.39
SCN2AQ99250 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 RNU6-508P-201ENST00000363231 103 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 Y_RNA.272-201ENST00000364696 102 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 RNU6-463P-201ENST00000384340 107 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 SNORA42.1-201ENST00000363515 137 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 Y_RNA.337-201ENST00000365312 102 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 snosnR66.1-201ENST00000391095 99 ntBASIC0.13□□□□□ -2.39
SCN2AQ99250 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SCN2AQ99250 Y_RNA.400-201ENST00000383963 111 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 PCNPP3-201ENST00000393579 471 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 AC097635.1-201ENST00000450678 155 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 RNA5SP134-201ENST00000516492 96 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 RNU7-121P-201ENST00000516604 62 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 MIR4500-201ENST00000579472 76 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 MIR5706-201ENST00000579841 80 ntBASIC0.12□□□□□ -2.39
SCN2AQ99250 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 AC141557.1-201ENST00000540982 400 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 AC021753.1-201ENST00000635724 168 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 AC091304.10-201ENST00000641554 121 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
SCN2AQ99250 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
SCN2AQ99250 RNU6-151P-201ENST00000364158 107 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 Y_RNA.233-201ENST00000364407 101 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 RNU4-83P-201ENST00000410863 133 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 Y_RNA.692-201ENST00000516627 105 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 RNU7-137P-201ENST00000516788 62 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 SNORA81.3-201ENST00000517283 198 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 MIR3678-201ENST00000578455 94 ntBASIC0.11□□□□□ -2.39
SCN2AQ99250 SNORA36.1-201ENST00000363424 132 ntBASIC0.1□□□□□ -2.39
SCN2AQ99250 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
SCN2AQ99250 RNU6-200P-201ENST00000364743 107 ntBASIC0.1□□□□□ -2.39
SCN2AQ99250 RNY1P2-201ENST00000364820 117 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms