Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS50Q96JG6 MIR520F-201ENST00000384824 87 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 SNORA7.5-201ENST00000410672 110 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 AL353813.1-201ENST00000440700 253 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 RNU7-56P-201ENST00000458744 62 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 RNA5SP220-201ENST00000516298 104 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 MIR8066-201ENST00000617280 78 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 U6.109-201ENST00000636749 87 ntBASIC1.01□□□□□ -2.25
VPS50Q96JG6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
VPS50Q96JG6 Y_RNA.13-201ENST00000362403 112 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNA5SP133-201ENST00000363368 119 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU4-67P-201ENST00000364569 141 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 SNORA72.6-201ENST00000384520 129 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU6-816P-201ENST00000390914 107 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU6-1268P-201ENST00000391214 107 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU6-1239P-201ENST00000391310 107 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
VPS50Q96JG6 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 MIR4679-2-201ENST00000578358 77 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
VPS50Q96JG6 RNU6-363P-201ENST00000362895 105 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 RNU6-1056P-201ENST00000383996 107 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 MIR605-201ENST00000385078 83 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 RNU6-679P-201ENST00000391003 106 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 RNU7-48P-201ENST00000458875 63 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 RNU7-102P-201ENST00000458948 62 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 AC133485.1-201ENST00000567176 124 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 SNORD92-201ENST00000585078 85 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 AL162726.3-218ENST00000636401 95 ntBASIC0.99□□□□□ -2.25
VPS50Q96JG6 Y_RNA.273-201ENST00000364703 102 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 Y_RNA.328-201ENST00000365208 113 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 RNU6-364P-201ENST00000384387 107 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 RNU6-880P-201ENST00000384526 107 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 MIR34C-201ENST00000384831 77 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS50Q96JG6 RNU6-531P-201ENST00000516694 104 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 MIR548AI-201ENST00000579940 88 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 MIR376B-201ENST00000614515 100 ntBASIC0.98□□□□□ -2.25
VPS50Q96JG6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 Y_RNA.155-201ENST00000363632 101 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 MIR520H-201ENST00000385126 88 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 SNORD105-201ENST00000386910 85 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 RPL39P34-201ENST00000477141 156 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 MIR6082-201ENST00000613604 109 ntBASIC0.97□□□□□ -2.25
VPS50Q96JG6 RNU6-834P-201ENST00000362367 110 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 Y_RNA.281-201ENST00000364774 94 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 RNY1P2-201ENST00000364820 117 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 U8.6-201ENST00000364939 135 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 RNU6-409P-201ENST00000384114 104 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 AC068339.1-201ENST00000526965 141 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 DEFB131E-201ENST00000532329 154 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
VPS50Q96JG6 Y_RNA.98-201ENST00000363109 102 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-865P-201ENST00000364772 107 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-1325P-201ENST00000364905 105 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 SNORD114-22-201ENST00000365423 72 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU1-119P-201ENST00000391122 165 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-447P-201ENST00000410293 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-355P-201ENST00000410427 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-791P-201ENST00000410467 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-705P-201ENST00000410601 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-860P-201ENST00000410860 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU6-785P-201ENST00000411324 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 Y_RNA.629-201ENST00000411368 105 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS50Q96JG6 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 U6.90-201ENST00000614007 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 U6.70-201ENST00000620287 104 ntBASIC0.95□□□□□ -2.26
VPS50Q96JG6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS50Q96JG6 RNU1-93P-201ENST00000364704 169 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 SNORD20-201ENST00000384550 80 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 RNU6-733P-201ENST00000410759 104 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 RNU6-589P-201ENST00000516485 107 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 AC090897.1-201ENST00000580909 226 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 MIR6734-201ENST00000621166 68 ntBASIC0.94□□□□□ -2.26
VPS50Q96JG6 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 Y_RNA.247-201ENST00000364500 92 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 RNU6-1107P-201ENST00000364817 104 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 Y_RNA.309-201ENST00000365046 111 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms