Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC138907.4-201ENST00000570107 226 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 MIR6755-201ENST00000619993 66 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 MIR6844-201ENST00000637122 62 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.03□□□□□ -2.4
SKA1Q96BD8 Y_RNA.447-201ENST00000384184 113 ntBASIC0.03□□□□□ -2.4
SKA1Q96BD8 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
SKA1Q96BD8 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.03□□□□□ -2.4
SKA1Q96BD8 AC138749.4-201ENST00000563970 127 ntBASIC0.03□□□□□ -2.4
SKA1Q96BD8 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 Y_RNA.193-201ENST00000363979 102 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 Y_RNA.299-201ENST00000364973 94 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 Y_RNA.680-201ENST00000516441 93 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 MIR3646-201ENST00000578301 84 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 MIR3149-201ENST00000584629 83 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 AC021443.1-201ENST00000604478 211 ntBASIC0.02□□□□□ -2.41
SKA1Q96BD8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 SNORA63.5-201ENST00000363548 123 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNA5SP245-201ENST00000364239 121 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 SNORD18B-201ENST00000365659 72 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNU6-196P-201ENST00000384315 107 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 PCNPP3-201ENST00000393579 471 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNU6-240P-201ENST00000516098 97 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 AC138869.1-201ENST00000568623 124 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 MIR548H5-201ENST00000580314 60 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 RNU7-10P-201ENST00000607194 63 ntBASIC0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
SKA1Q96BD8 SNORA2A-201ENST00000383885 135 ntBASIC0□□□□□ -2.41
SKA1Q96BD8 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
SKA1Q96BD8 RNU2-35P-201ENST00000516446 142 ntBASIC0□□□□□ -2.41
SKA1Q96BD8 SNORD115-24-201ENST00000363528 82 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 RNY1P2-201ENST00000364820 117 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 MIR548L-201ENST00000408303 86 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 MTND3P2-201ENST00000438452 342 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 RNU7-164P-201ENST00000459221 62 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 AC067863.3-201ENST00000624172 122 ntBASIC-0.01□□□□□ -2.41
SKA1Q96BD8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 RNU6-47P-201ENST00000383866 107 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 RNU6-429P-201ENST00000384582 108 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 AC244505.6-201ENST00000452829 130 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 AL359881.1-201ENST00000602916 267 ntBASIC-0.02□□□□□ -2.41
SKA1Q96BD8 RNA5SP128-201ENST00000365305 116 ntBASIC-0.03□□□□□ -2.41
SKA1Q96BD8 RNU4-69P-201ENST00000410677 143 ntBASIC-0.03□□□□□ -2.41
SKA1Q96BD8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.03□□□□□ -2.41
SKA1Q96BD8 AC105081.1-201ENST00000617727 106 ntBASIC-0.03□□□□□ -2.41
SKA1Q96BD8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 SNORD37.2-201ENST00000391075 66 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 SNORD77B-201ENST00000391112 67 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 MIR4503-201ENST00000582187 83 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 AC009779.6-201ENST00000603972 165 ntBASIC-0.04□□□□□ -2.42
SKA1Q96BD8 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
SKA1Q96BD8 RNU6-239P-201ENST00000390990 99 ntBASIC-0.05□□□□□ -2.42
SKA1Q96BD8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.05□□□□□ -2.42
SKA1Q96BD8 RNU6-588P-201ENST00000410281 105 ntBASIC-0.05□□□□□ -2.42
SKA1Q96BD8 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.05□□□□□ -2.42
SKA1Q96BD8 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.07□□□□□ -2.42
SKA1Q96BD8 MIR892B-201ENST00000401279 77 ntBASIC-0.07□□□□□ -2.42
SKA1Q96BD8 RNU7-123P-201ENST00000515911 60 ntBASIC-0.07□□□□□ -2.42
SKA1Q96BD8 AC072026.1-201ENST00000605023 201 ntBASIC-0.07□□□□□ -2.42
SKA1Q96BD8 RNU6-726P-201ENST00000364680 107 ntBASIC-0.08□□□□□ -2.42
SKA1Q96BD8 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.08□□□□□ -2.42
SKA1Q96BD8 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.08□□□□□ -2.42
SKA1Q96BD8 RPL39P34-201ENST00000477141 156 ntBASIC-0.08□□□□□ -2.42
SKA1Q96BD8 MIR4752-201ENST00000579672 72 ntBASIC-0.08□□□□□ -2.42
SKA1Q96BD8 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 MIR635-201ENST00000384830 98 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 U7.6-201ENST00000610841 64 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 MIR6759-201ENST00000638110 65 ntBASIC-0.09□□□□□ -2.42
SKA1Q96BD8 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 MIR643-201ENST00000385267 97 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
SKA1Q96BD8 RNU7-48P-201ENST00000458875 63 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 RNU7-104P-201ENST00000459398 79 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 RNU2-60P-201ENST00000517290 128 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 AC130289.1-201ENST00000577321 73 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.1□□□□□ -2.43
SKA1Q96BD8 SNORD114-5-201ENST00000362928 70 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 RNU4-84P-201ENST00000364200 139 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 MIR4500-201ENST00000579472 76 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
SKA1Q96BD8 RNU6-652P-201ENST00000365488 107 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 339.1 ms