Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
HPS1Q92902 AL033523.1-201ENST00000605153 153 ntBASIC2.5□□□□□ -2.01
HPS1Q92902 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HPS1Q92902 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
HPS1Q92902 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HPS1Q92902 RNU6-1187P-201ENST00000364771 110 ntBASIC2.49□□□□□ -2.01
HPS1Q92902 MIR18B-201ENST00000454574 71 ntBASIC2.49□□□□□ -2.01
HPS1Q92902 MIR3162-201ENST00000581818 82 ntBASIC2.49□□□□□ -2.01
HPS1Q92902 AL109933.3-201ENST00000619095 188 ntBASIC2.49□□□□□ -2.01
HPS1Q92902 MIR512-1-201ENST00000384913 84 ntBASIC2.48□□□□□ -2.01
HPS1Q92902 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
HPS1Q92902 MIR514B-201ENST00000516774 80 ntBASIC2.48□□□□□ -2.01
HPS1Q92902 AC013244.2-201ENST00000603396 103 ntBASIC2.48□□□□□ -2.01
HPS1Q92902 SNRPGP19-201ENST00000603826 189 ntBASIC2.48□□□□□ -2.01
HPS1Q92902 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS1Q92902 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HPS1Q92902 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
HPS1Q92902 RNU6-403P-201ENST00000363163 104 ntBASIC2.47□□□□□ -2.01
HPS1Q92902 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.47□□□□□ -2.01
HPS1Q92902 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.47□□□□□ -2.01
HPS1Q92902 AC097635.1-201ENST00000450678 155 ntBASIC2.47□□□□□ -2.01
HPS1Q92902 MIR4672-201ENST00000583126 81 ntBASIC2.47□□□□□ -2.01
HPS1Q92902 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
HPS1Q92902 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HPS1Q92902 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 MIR451A-201ENST00000385059 72 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 RNU6-1177P-201ENST00000391058 104 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 RNU6-1052P-201ENST00000411398 104 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 AL161935.2-201ENST00000414627 60 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 AL691482.2-201ENST00000457453 84 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 RNU6-274P-201ENST00000459566 107 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 RNU6-719P-201ENST00000516671 104 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 MIR6516-201ENST00000630554 81 ntBASIC2.46□□□□□ -2.02
HPS1Q92902 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HPS1Q92902 RNU6-654P-201ENST00000364373 107 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 RNU6-580P-201ENST00000365159 107 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 RNA5SP184-201ENST00000411071 108 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 RNU6-1054P-201ENST00000411293 104 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
HPS1Q92902 AP003716.2-201ENST00000528260 108 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HPS1Q92902 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HPS1Q92902 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HPS1Q92902 AC131280.1-202ENST00000624067 4211 ntBASIC2.45□□□□□ -2.02
HPS1Q92902 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HPS1Q92902 RNA5SP259-201ENST00000365541 109 ntBASIC2.44□□□□□ -2.02
HPS1Q92902 U3.27-201ENST00000391237 200 ntBASIC2.44□□□□□ -2.02
HPS1Q92902 RNU6-922P-201ENST00000516753 99 ntBASIC2.44□□□□□ -2.02
HPS1Q92902 MIR4773-1-201ENST00000637203 78 ntBASIC2.44□□□□□ -2.02
HPS1Q92902 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.44□□□□□ -2.02
HPS1Q92902 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HPS1Q92902 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
HPS1Q92902 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HPS1Q92902 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HPS1Q92902 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
HPS1Q92902 MIR513A1-201ENST00000385138 129 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 AC244098.3-201ENST00000424803 96 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 snoU13.25-201ENST00000458945 104 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 RNU6-1265P-201ENST00000516342 103 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 Y_RNA.697-201ENST00000516776 113 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 MIR6082-201ENST00000613604 109 ntBASIC2.43□□□□□ -2.02
HPS1Q92902 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HPS1Q92902 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HPS1Q92902 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
HPS1Q92902 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HPS1Q92902 RNU6-382P-201ENST00000365181 106 ntBASIC2.42□□□□□ -2.02
HPS1Q92902 AC087499.2-201ENST00000432861 149 ntBASIC2.42□□□□□ -2.02
HPS1Q92902 RNU6-542P-201ENST00000516405 103 ntBASIC2.42□□□□□ -2.02
HPS1Q92902 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HPS1Q92902 MIR26A1-201ENST00000362205 77 ntBASIC2.41□□□□□ -2.02
HPS1Q92902 SNORA16B-201ENST00000364674 135 ntBASIC2.41□□□□□ -2.02
HPS1Q92902 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.41□□□□□ -2.02
HPS1Q92902 AC092634.7-201ENST00000621022 103 ntBASIC2.41□□□□□ -2.02
HPS1Q92902 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
HPS1Q92902 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 RNU6-1079P-201ENST00000362861 110 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 Y_RNA.258-201ENST00000364613 105 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 MIR599-201ENST00000385069 95 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 MIR9-1-201ENST00000385198 89 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 MTND4LP1-201ENST00000446263 157 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 AL133373.1-201ENST00000497098 94 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 RNU6-982P-201ENST00000516216 102 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 RNU6-765P-201ENST00000516916 99 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 RNU6-250P-201ENST00000516958 103 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 AC138907.6-201ENST00000568401 126 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 AC138869.1-201ENST00000568623 124 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.03
HPS1Q92902 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
HPS1Q92902 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
HPS1Q92902 Y_RNA.13-201ENST00000362403 112 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 Y_RNA.375-201ENST00000365625 101 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 MIR1185-1-201ENST00000408598 86 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 Y_RNA.722-201ENST00000517279 114 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 MIR3920-201ENST00000581751 86 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 GHRLOS.1-201ENST00000610995 70 ntBASIC2.39□□□□□ -2.03
HPS1Q92902 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms