Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SNORD38B-201ENST00000384690 67 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 Y_RNA.648-201ENST00000459455 110 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 RNU6-871P-201ENST00000516122 100 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 AC138749.4-201ENST00000563970 127 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 SNORA77B-201ENST00000578179 125 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 SNORD38B-202ENST00000625943 69 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 RNU6-132P-201ENST00000383863 107 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 RNU6-811P-201ENST00000384069 107 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 RNA5SP182-201ENST00000516064 82 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 AL662814.1-201ENST00000617364 121 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 MIR4251-201ENST00000635819 61 ntBASIC2.12□□□□□ -2.07
TMEM40Q8WWA1 RNU1-17P-201ENST00000363022 152 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 SNORD90-201ENST00000391145 111 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 MIR4536-1-201ENST00000583537 88 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 AL357312.1-201ENST00000603879 298 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 MIR8063-201ENST00000621930 81 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.11□□□□□ -2.07
TMEM40Q8WWA1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 SNORA25.9-201ENST00000365087 128 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 SNORD41-201ENST00000386967 70 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 AC244023.1-201ENST00000426884 112 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 HSPE1P24-201ENST00000450782 238 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 RNU6-634P-201ENST00000459134 106 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 FGF7P7-201ENST00000514120 227 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 RNU7-41P-201ENST00000515917 61 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 SNORA44.1-201ENST00000517031 108 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 AC242498.1-201ENST00000604134 111 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 U6.109-201ENST00000636749 87 ntBASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TMEM40Q8WWA1 RNA5SP48-201ENST00000363969 126 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 RNU6-949P-201ENST00000384040 107 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 RNU6-649P-201ENST00000384463 107 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 SNORA72.6-201ENST00000384520 129 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 RNU6-540P-201ENST00000384622 101 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 MIR516A2-201ENST00000384888 90 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 MIR516A1-201ENST00000385033 90 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 snoU13.9-201ENST00000458927 103 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 Y_RNA.681-201ENST00000516445 113 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 AC103810.8-201ENST00000607347 118 ntBASIC2.09□□□□□ -2.07
TMEM40Q8WWA1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.119-201ENST00000363301 96 ntBASIC2.08□□□□□ -2.08
TMEM40Q8WWA1 MIR9-3-201ENST00000385084 90 ntBASIC2.08□□□□□ -2.08
TMEM40Q8WWA1 RNU6-75P-201ENST00000515944 104 ntBASIC2.08□□□□□ -2.08
TMEM40Q8WWA1 RNU6-807P-201ENST00000516805 107 ntBASIC2.08□□□□□ -2.08
TMEM40Q8WWA1 SNORD36A-201ENST00000362874 73 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 MIR520H-201ENST00000385126 88 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 SNORD77.2-201ENST00000391045 68 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 SNORD30.1-201ENST00000391309 70 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 AC009474.2-201ENST00000451383 136 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.660-201ENST00000516002 120 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 MIR3064-201ENST00000581130 66 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 AC104996.3-201ENST00000590718 94 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 GHRLOS.1-201ENST00000610995 70 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TMEM40Q8WWA1 MIRLET7F1-201ENST00000362202 87 ntBASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.205-201ENST00000364128 113 ntBASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TMEM40Q8WWA1 RNU6-208P-201ENST00000362431 107 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.283-201ENST00000364798 112 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU6-571P-201ENST00000384128 107 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.491-201ENST00000384417 107 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU6-800P-201ENST00000384473 103 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 MIR588-201ENST00000384900 83 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 SNORA17.3-201ENST00000391159 129 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU6-587P-201ENST00000391282 106 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU2-59P-201ENST00000410482 191 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 AC015818.7-201ENST00000428754 109 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 snoU13.2-201ENST00000459201 104 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU7-106P-201ENST00000459514 67 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNA5SP458-201ENST00000516188 119 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 RNU6-250P-201ENST00000516958 103 ntBASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TMEM40Q8WWA1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TMEM40Q8WWA1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
TMEM40Q8WWA1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TMEM40Q8WWA1 RNU5F-1-201ENST00000362507 117 ntBASIC2.04□□□□□ -2.08
TMEM40Q8WWA1 SNORD115-31-201ENST00000365318 82 ntBASIC2.04□□□□□ -2.08
TMEM40Q8WWA1 Y_RNA.596-201ENST00000410462 109 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms