Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.41□□□□□ -2.34
LDB1Q86U70 MTND5P34-201ENST00000568888 325 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 U6.109-201ENST00000636749 87 ntBASIC0.41□□□□□ -2.34
LDB1Q86U70 Y_RNA.32-201ENST00000362589 110 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 RNU6-886P-201ENST00000384319 105 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 RNU6-291P-201ENST00000384720 107 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 RNU6-535P-201ENST00000384722 107 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 PCNPP3-201ENST00000393579 471 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 RNU7-197P-201ENST00000458836 62 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 RNU6-531P-201ENST00000516694 104 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 AC022523.2-201ENST00000561045 150 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 AL359881.1-201ENST00000602916 267 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 AL137067.1-201ENST00000615933 120 ntBASIC0.4□□□□□ -2.35
LDB1Q86U70 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 SNORA8.2-201ENST00000384372 139 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LDB1Q86U70 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 RNY4P20-201ENST00000516678 93 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 MTND5P41-201ENST00000517498 206 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 AC098479.1-201ENST00000609225 154 ntBASIC0.39□□□□□ -2.35
LDB1Q86U70 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 MIR1270-201ENST00000459320 83 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 Y_RNA.692-201ENST00000516627 105 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 RNU6-794P-201ENST00000517261 64 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 AC138749.4-201ENST00000563970 127 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 AC021753.1-201ENST00000635724 168 ntBASIC0.38□□□□□ -2.35
LDB1Q86U70 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 RNU6-1104P-201ENST00000384723 104 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 SNORD77B-201ENST00000391112 67 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 RNA5SP272-201ENST00000516095 111 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 MIR548X2-201ENST00000579776 100 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 RN7SL793P-201ENST00000583259 296 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
LDB1Q86U70 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
LDB1Q86U70 MIR101-2-201ENST00000362195 79 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 Y_RNA.294-201ENST00000364916 102 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 Y_RNA.400-201ENST00000383963 111 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 Y_RNA.420-201ENST00000384043 110 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 RNY1P4-201ENST00000384595 115 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 AP001328.1-201ENST00000528550 176 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 MIR3121-201ENST00000579680 77 ntBASIC0.36□□□□□ -2.35
LDB1Q86U70 Y_RNA.36-201ENST00000362602 112 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 Y_RNA.119-201ENST00000363301 96 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 Y_RNA.215-201ENST00000364204 112 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 RNU6-1229P-201ENST00000364295 107 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 RNY1P2-201ENST00000364820 117 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 AC108059.2-201ENST00000434626 151 ntBASIC0.35□□□□□ -2.35
LDB1Q86U70 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 Y_RNA.114-201ENST00000363265 113 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 SNORA63.5-201ENST00000363548 123 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 Y_RNA.448-201ENST00000384185 108 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 MIR206-201ENST00000384872 86 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 MIR569-201ENST00000385228 96 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 RNU6-1321P-201ENST00000390905 107 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 MIR3671-201ENST00000580455 88 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 MIR4639-201ENST00000584938 69 ntBASIC0.34□□□□□ -2.36
LDB1Q86U70 RNA5SP245-201ENST00000364239 121 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 RNU6-429P-201ENST00000384582 108 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 RNA5SP268-201ENST00000516828 124 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 RNA5SP47-201ENST00000517230 109 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 IGKV1-22-201ENST00000524313 326 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 MIR6828-201ENST00000636181 60 ntBASIC0.33□□□□□ -2.36
LDB1Q86U70 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
LDB1Q86U70 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
LDB1Q86U70 Y_RNA.56-201ENST00000362798 112 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 RNU6-616P-201ENST00000384353 107 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 Y_RNA.488-201ENST00000384403 102 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 Y_RNA.555-201ENST00000384673 110 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 SNORD28-201ENST00000384706 75 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 SUMO1P3-201ENST00000439961 304 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 RNU6-863P-201ENST00000515989 104 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 RNU6-426P-201ENST00000516464 97 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 RNU7-6P-201ENST00000516845 62 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 SCARNA16.5-201ENST00000517114 183 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 AP001340.1-201ENST00000624405 217 ntBASIC0.32□□□□□ -2.36
LDB1Q86U70 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RNU6-1099P-201ENST00000363533 107 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RNU6-1307P-201ENST00000391012 103 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 MIR1263-201ENST00000408324 86 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RNU7-48P-201ENST00000458875 63 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RN7SKP19-201ENST00000516016 252 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
LDB1Q86U70 Y_RNA.98-201ENST00000363109 102 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 Y_RNA.170-201ENST00000363746 110 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 RNU6-647P-201ENST00000364243 107 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 MT-TI-201ENST00000387365 69 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 RNU7-2P-201ENST00000516096 62 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 AC010487.4-201ENST00000637027 61 ntBASIC0.3□□□□□ -2.36
LDB1Q86U70 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms