Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-90P-201ENST00000606352 106 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRPF40BQ6NWY9 SNORD53B-201ENST00000577887 78 ntBASIC2.04□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-86P-201ENST00000606534 107 ntBASIC2.04□□□□□ -2.08
PRPF40BQ6NWY9 MIR6740-201ENST00000618268 113 ntBASIC2.04□□□□□ -2.08
PRPF40BQ6NWY9 RNA5SP264-201ENST00000363115 107 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 U8.15-201ENST00000390947 134 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 AC008834.1-201ENST00000511612 175 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 RNU11-2P-201ENST00000516898 142 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.03□□□□□ -2.08
PRPF40BQ6NWY9 MIR494-201ENST00000349529 81 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 SNORD116-10-201ENST00000363791 102 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.567-201ENST00000384736 106 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 snoU13.25-201ENST00000458945 104 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 AC062037.1-201ENST00000605302 128 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 MIR6504-201ENST00000613520 61 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 MIR6516-201ENST00000630554 81 ntBASIC2.02□□□□□ -2.09
PRPF40BQ6NWY9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-1163P-201ENST00000364516 107 ntBASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-42P-201ENST00000384165 107 ntBASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 RN7SKP12-201ENST00000516275 143 ntBASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 AC103810.7-201ENST00000607821 91 ntBASIC2.01□□□□□ -2.09
PRPF40BQ6NWY9 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
PRPF40BQ6NWY9 MIR4422-201ENST00000581938 83 ntBASIC2□□□□□ -2.09
PRPF40BQ6NWY9 SEPT14P17-201ENST00000617978 177 ntBASIC2□□□□□ -2.09
PRPF40BQ6NWY9 AC012676.2-201ENST00000619258 186 ntBASIC2□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.17-201ENST00000362433 111 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 RNY1P2-201ENST00000364820 117 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.388-201ENST00000383919 113 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-820P-201ENST00000384273 107 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MIR563-201ENST00000385080 79 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MT-TF-201ENST00000387314 71 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 RNU1-78P-201ENST00000391248 165 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-613P-201ENST00000410412 108 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MIR6734-201ENST00000621166 68 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 U6.109-201ENST00000636749 87 ntBASIC1.99□□□□□ -2.09
PRPF40BQ6NWY9 MIR377-201ENST00000362145 69 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-1244P-201ENST00000363614 108 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 SNORA7.1-201ENST00000363750 139 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.190-201ENST00000363964 101 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 RNU6-654P-201ENST00000364373 107 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 Y_RNA.593-201ENST00000410292 98 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 RNA5SP95-201ENST00000410319 137 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 AC090897.1-201ENST00000580909 226 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 AL078603.1-201ENST00000603824 313 ntBASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF40BQ6NWY9 MIR30D-201ENST00000362283 70 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 RNY1P1-201ENST00000364372 112 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 SNORD116-22-201ENST00000384430 92 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 SNORA67.6-201ENST00000391093 99 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 MIR934-201ENST00000401241 83 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 AP003716.2-201ENST00000528260 108 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 AL512310.8-201ENST00000550183 120 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 IGLL4P-201ENST00000614590 133 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 RMST_2.1-201ENST00000617263 136 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 MIR6779-201ENST00000617283 64 ntBASIC1.97□□□□□ -2.09
PRPF40BQ6NWY9 SNORD58A-201ENST00000383875 65 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 MIR1323-201ENST00000408090 73 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 RN7SKP88-201ENST00000516847 250 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 MIR4421-201ENST00000578133 69 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 MIR4500-201ENST00000579472 76 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 7SK.8-201ENST00000612110 250 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 7SK.11-201ENST00000615477 250 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 7SK.13-201ENST00000622040 250 ntBASIC1.96□□□□□ -2.1
PRPF40BQ6NWY9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNA5SP133-201ENST00000363368 119 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNA5SP363-201ENST00000365072 115 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNU6-480P-201ENST00000384332 107 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNU1-98P-201ENST00000458992 160 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 AC138749.4-201ENST00000563970 127 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 MIR4452-201ENST00000583004 71 ntBASIC1.95□□□□□ -2.1
PRPF40BQ6NWY9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.94□□□□□ -2.1
PRPF40BQ6NWY9 RNU6-53P-201ENST00000365367 106 ntBASIC1.94□□□□□ -2.1
PRPF40BQ6NWY9 SNORA2B-201ENST00000384583 137 ntBASIC1.94□□□□□ -2.1
PRPF40BQ6NWY9 RNU1-123P-201ENST00000458950 160 ntBASIC1.94□□□□□ -2.1
PRPF40BQ6NWY9 RNU6-165P-201ENST00000517170 99 ntBASIC1.94□□□□□ -2.1
PRPF40BQ6NWY9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 HSBP1P2-201ENST00000299671 229 ntBASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 RNA5SP173-201ENST00000364857 136 ntBASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 RNA5SP220-201ENST00000516298 104 ntBASIC1.93□□□□□ -2.1
PRPF40BQ6NWY9 RNA5SP102-201ENST00000516865 106 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms