Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR8074-201ENST00000615081 81 ntBASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-411P-201ENST00000384451 107 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 MIR563-201ENST00000385080 79 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 RNA5SP292-201ENST00000390974 118 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 AP1B1P2-201ENST00000416196 106 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 AC023790.1-201ENST00000482174 347 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 RN7SL274P-201ENST00000492268 272 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-1108P-201ENST00000516308 104 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-1015P-201ENST00000517121 99 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
PRPF38BQ5VTL8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PRPF38BQ5VTL8 BX248123.2-201ENST00000606318 124 ntBASIC2.59□□□□□ -1.99
PRPF38BQ5VTL8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.59□□□□□ -1.99
PRPF38BQ5VTL8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PRPF38BQ5VTL8 AL161722.3-201ENST00000605789 2983 ntBASIC2.59□□□□□ -2
PRPF38BQ5VTL8 AC016717.2-201ENST00000609089 5141 ntBASIC2.58□□□□□ -2
PRPF38BQ5VTL8 RNU6-571P-201ENST00000384128 107 ntBASIC2.58□□□□□ -2
PRPF38BQ5VTL8 SNORA67.3-201ENST00000384366 140 ntBASIC2.58□□□□□ -2
PRPF38BQ5VTL8 SNORA77B-201ENST00000578179 125 ntBASIC2.58□□□□□ -2
PRPF38BQ5VTL8 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
PRPF38BQ5VTL8 MIR30D-201ENST00000362283 70 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 RNU6-811P-201ENST00000384069 107 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 MT-TN-201ENST00000387400 73 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 RNU6-380P-201ENST00000410207 107 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 AL133373.1-201ENST00000497098 94 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 FGF7P7-201ENST00000514120 227 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 Y_RNA.660-201ENST00000516002 120 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 MIR4713-201ENST00000582691 75 ntBASIC2.57□□□□□ -2
PRPF38BQ5VTL8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF38BQ5VTL8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF38BQ5VTL8 MIR103A2-201ENST00000362154 78 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 SNORA16B-201ENST00000364674 135 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 MT-TF-201ENST00000387314 71 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 RNU6-250P-201ENST00000516958 103 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 RNU6-448P-201ENST00000517052 107 ntBASIC2.56□□□□□ -2
PRPF38BQ5VTL8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRPF38BQ5VTL8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
PRPF38BQ5VTL8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PRPF38BQ5VTL8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PRPF38BQ5VTL8 Y_RNA.36-201ENST00000362602 112 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 SNORA72.6-201ENST00000384520 129 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 MIR635-201ENST00000384830 98 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 MIR520H-201ENST00000385126 88 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 SNORA18.5-201ENST00000516616 101 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 MIR6895-201ENST00000613497 78 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 MIR6516-201ENST00000630554 81 ntBASIC2.55□□□□□ -2
PRPF38BQ5VTL8 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 SNORD36A-201ENST00000362874 73 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RNU6-53P-201ENST00000365367 106 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RNU6-132P-201ENST00000383863 107 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RPL30P7-201ENST00000479312 323 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RNU6-75P-201ENST00000515944 104 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RNU6-871P-201ENST00000516122 100 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 MIR4484-201ENST00000582855 83 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 MIR4536-1-201ENST00000583537 88 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 SNRPGP19-201ENST00000603826 189 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRPF38BQ5VTL8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRPF38BQ5VTL8 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
PRPF38BQ5VTL8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF38BQ5VTL8 MIR4452-201ENST00000583004 71 ntBASIC2.53□□□□□ -2
PRPF38BQ5VTL8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF38BQ5VTL8 AC008163.1-202ENST00000636004 2889 ntBASIC2.53□□□□□ -2
PRPF38BQ5VTL8 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 Y_RNA.340-201ENST00000365330 92 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 MIR1265-201ENST00000408444 86 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 SNORD93-201ENST00000408813 74 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 snoU13.9-201ENST00000458927 103 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 snoU13.25-201ENST00000458945 104 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 AC125388.1-201ENST00000459631 156 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-70P-201ENST00000516438 60 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-687P-201ENST00000516443 89 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 RNU11-2P-201ENST00000516898 142 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 MIR3064-201ENST00000581130 66 ntBASIC2.52□□□□□ -2.01
PRPF38BQ5VTL8 RNA5SP264-201ENST00000363115 107 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 MIR516A2-201ENST00000384888 90 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 MIR516A1-201ENST00000385033 90 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 RNA5SP95-201ENST00000410319 137 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 AC019176.1-201ENST00000518519 225 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 MIR4299-201ENST00000577899 72 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 AC104996.3-201ENST00000590718 94 ntBASIC2.51□□□□□ -2.01
PRPF38BQ5VTL8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-654P-201ENST00000364373 107 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 Y_RNA.283-201ENST00000364798 112 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 SNORD77.2-201ENST00000391045 68 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 MIR1185-1-201ENST00000408598 86 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 RNU4-62P-201ENST00000410125 130 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 RNU6-634P-201ENST00000459134 106 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 uc_338.6-201ENST00000613544 171 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 MIR664A-201ENST00000626086 82 ntBASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PRPF38BQ5VTL8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 287.5 ms