Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MTND5P34-201ENST00000568888 325 ntBASIC0.46□□□□□ -2.34
LRIF1Q5T3J3 AC105081.1-201ENST00000617727 106 ntBASIC0.46□□□□□ -2.34
LRIF1Q5T3J3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.46□□□□□ -2.34
LRIF1Q5T3J3 MIR101-2-201ENST00000362195 79 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.343-201ENST00000365354 112 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 MIR206-201ENST00000384872 86 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 MIR644A-201ENST00000385262 94 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 SNORD71-201ENST00000411292 86 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 RPS29P1-201ENST00000465274 159 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 MIR3163-201ENST00000581592 73 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 AL078603.1-201ENST00000603824 313 ntBASIC0.45□□□□□ -2.34
LRIF1Q5T3J3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.198-201ENST00000364013 98 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.213-201ENST00000364178 111 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 RNU7-48P-201ENST00000458875 63 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 RNU7-2P-201ENST00000516096 62 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 RNU6-426P-201ENST00000516464 97 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 MIR6788-201ENST00000618842 66 ntBASIC0.44□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 RNA5SP220-201ENST00000516298 104 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 RNU7-10P-201ENST00000607194 63 ntBASIC0.43□□□□□ -2.34
LRIF1Q5T3J3 SNORD115-19-201ENST00000363098 82 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 SNORD115-18-201ENST00000363293 82 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 SNORD115-17-201ENST00000364612 82 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 SNORD115-35-201ENST00000365122 82 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 RNU6-907P-201ENST00000390924 102 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 MIR548J-201ENST00000408833 112 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 RNU7-6P-201ENST00000516845 62 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 RNU6-255P-201ENST00000516957 105 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 MIR548H5-201ENST00000580314 60 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 AP001362.1-201ENST00000625165 124 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 MIR6828-201ENST00000636181 60 ntBASIC0.42□□□□□ -2.34
LRIF1Q5T3J3 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 RNU6-616P-201ENST00000384353 107 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 SNORA40-201ENST00000388090 126 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 MIR548I1-201ENST00000408810 149 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 RNU6-863P-201ENST00000515989 104 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 MIR151B-201ENST00000584249 96 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 AC087741.2-201ENST00000619415 172 ntBASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
LRIF1Q5T3J3 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 SNORA36.1-201ENST00000363424 132 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 SNORD28-201ENST00000384706 75 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 RNA5SP47-201ENST00000517230 109 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 AC138869.1-201ENST00000568623 124 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 MIR5000-201ENST00000577717 103 ntBASIC0.4□□□□□ -2.35
LRIF1Q5T3J3 Y_RNA.127-201ENST00000363386 109 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 RNU6-865P-201ENST00000364772 107 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 RNU6-209P-201ENST00000384118 107 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 MIR216A-201ENST00000385063 110 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 MIR1263-201ENST00000408324 86 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 MTND4LP9-201ENST00000427694 174 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 AC244505.6-201ENST00000452829 130 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
LRIF1Q5T3J3 RNU6-42P-201ENST00000384165 107 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 MT-TI-201ENST00000387365 69 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 MIR1287-201ENST00000408492 90 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 RNA5SP272-201ENST00000516095 111 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 RNA5SP268-201ENST00000516828 124 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 AC091304.10-201ENST00000641554 121 ntBASIC0.38□□□□□ -2.35
LRIF1Q5T3J3 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
LRIF1Q5T3J3 RNA5SP245-201ENST00000364239 121 ntBASIC0.37□□□□□ -2.35
LRIF1Q5T3J3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.37□□□□□ -2.35
LRIF1Q5T3J3 MIR539-201ENST00000365690 78 ntBASIC0.37□□□□□ -2.35
LRIF1Q5T3J3 Y_RNA.528-201ENST00000384575 108 ntBASIC0.37□□□□□ -2.35
LRIF1Q5T3J3 MIR548I2-201ENST00000408348 149 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms