Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 MIR34C-201ENST00000384831 77 ntBASIC1.34□□□□□ -2.19
CCDC178Q5BJE1 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
CCDC178Q5BJE1 AL353813.1-201ENST00000440700 253 ntBASIC1.34□□□□□ -2.19
CCDC178Q5BJE1 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
CCDC178Q5BJE1 MIR376B-201ENST00000614515 100 ntBASIC1.34□□□□□ -2.19
CCDC178Q5BJE1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC178Q5BJE1 RNU7-185P-201ENST00000459215 60 ntBASIC1.33□□□□□ -2.2
CCDC178Q5BJE1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.33□□□□□ -2.2
CCDC178Q5BJE1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 RNU4-36P-201ENST00000364294 144 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 MIR577-201ENST00000385196 96 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 RNU4-83P-201ENST00000410863 133 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC178Q5BJE1 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU1-36P-201ENST00000365130 165 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 MIR590-201ENST00000385008 97 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 UBL5P1-201ENST00000507979 193 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 Y_RNA.659-201ENST00000515994 113 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 MIR4694-201ENST00000578534 80 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 AC020891.4-201ENST00000605745 93 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
CCDC178Q5BJE1 RNY3P2-201ENST00000362918 102 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-832P-201ENST00000363319 107 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1201P-201ENST00000384227 107 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1113P-201ENST00000384348 107 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 SNORD12-201ENST00000391002 90 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RPS26P5-201ENST00000418544 335 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 AC087343.1-201ENST00000477341 475 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-109P-201ENST00000516364 107 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-184P-201ENST00000516514 107 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 MIR4500-201ENST00000579472 76 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 MIR4491-201ENST00000581087 68 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CCDC178Q5BJE1 RNU6-766P-201ENST00000362478 107 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1313P-201ENST00000362622 102 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1099P-201ENST00000363533 107 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 Y_RNA.247-201ENST00000364500 92 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 AC090897.1-201ENST00000580909 226 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 AL442128.1-201ENST00000615151 90 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
CCDC178Q5BJE1 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 SNORA25.9-201ENST00000365087 128 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 MIR499A-201ENST00000384903 122 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 SPINT5P-201ENST00000448174 155 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 RNU6-977P-201ENST00000516411 103 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 RNU6-1018P-201ENST00000516577 106 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 MTND5P40-201ENST00000559945 246 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 MIR4676-201ENST00000583078 72 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 AC096720.1-201ENST00000604441 183 ntBASIC1.28□□□□□ -2.2
CCDC178Q5BJE1 RNY1P2-201ENST00000364820 117 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6-32P-201ENST00000383948 107 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6-13P-201ENST00000384248 107 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.495-201ENST00000384435 112 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6-12P-201ENST00000384604 107 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6-41P-201ENST00000384741 107 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 AC096949.1-201ENST00000412047 152 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 MIR3613-201ENST00000579844 87 ntBASIC1.27□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 SNORD38.2-201ENST00000384470 69 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 MIR125B2-201ENST00000385128 89 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 SNORD89-201ENST00000390981 114 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 RNU6-904P-201ENST00000516206 101 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 RNU6-795P-201ENST00000516323 103 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 RNU6-537P-201ENST00000517277 103 ntBASIC1.26□□□□□ -2.21
CCDC178Q5BJE1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms