Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 SNORD38.1-201ENST00000363863 68 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNU6-756P-201ENST00000383997 107 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 SNORA51.5-201ENST00000384126 131 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 MIR577-201ENST00000385196 96 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 MIR1827-201ENST00000408549 66 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 DEFB131E-201ENST00000532329 154 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNA5SP133-201ENST00000363368 119 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ZNF394Q53GI3 RNU6-765P-201ENST00000516916 99 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 MIR4498-201ENST00000577599 66 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 MIR4491-201ENST00000581087 68 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 MIR4676-201ENST00000583078 72 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 U6.109-201ENST00000636749 87 ntBASIC1.51□□□□□ -2.17
ZNF394Q53GI3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
ZNF394Q53GI3 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 RNU4-58P-201ENST00000363192 141 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 RNU6-153P-201ENST00000364422 104 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 MIR34C-201ENST00000384831 77 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 MIR100-201ENST00000385259 80 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 MIR938-201ENST00000401216 83 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 snoU13.31-201ENST00000607291 104 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.5□□□□□ -2.17
ZNF394Q53GI3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
ZNF394Q53GI3 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 RNU6-904P-201ENST00000516206 101 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 AC020891.4-201ENST00000605745 93 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
ZNF394Q53GI3 HSBP1P2-201ENST00000299671 229 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 BTF3P4-201ENST00000418852 495 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 AC004941.2-201ENST00000427009 228 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 U7.7-201ENST00000459276 60 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 UBL5P1-201ENST00000507979 193 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 RNU6-977P-201ENST00000516411 103 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 SNORD92-201ENST00000585078 85 ntBASIC1.48□□□□□ -2.17
ZNF394Q53GI3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
ZNF394Q53GI3 RNU6-403P-201ENST00000363163 104 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 SNORD45B-201ENST00000364617 72 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 SNORD114-24-201ENST00000365029 72 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 RNU6-364P-201ENST00000384387 107 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 MIR4439-201ENST00000583746 80 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 MIR6082-201ENST00000613604 109 ntBASIC1.47□□□□□ -2.17
ZNF394Q53GI3 RNU6-369P-201ENST00000362515 102 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU6-32P-201ENST00000383948 107 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU6-147P-201ENST00000383983 107 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU6-13P-201ENST00000384248 107 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 SNORA72.6-201ENST00000384520 129 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU6-12P-201ENST00000384604 107 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU6-41P-201ENST00000384741 107 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 RNU7-156P-201ENST00000517214 74 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 MIR4804-201ENST00000581683 73 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.45□□□□□ -2.18
ZNF394Q53GI3 MIR942-201ENST00000401111 86 ntBASIC1.45□□□□□ -2.18
ZNF394Q53GI3 SCARNA23-201ENST00000516060 130 ntBASIC1.45□□□□□ -2.18
ZNF394Q53GI3 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 AP003327.1-201ENST00000529684 127 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 RNU6-90P-201ENST00000606352 106 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 MIR8066-201ENST00000617280 78 ntBASIC1.44□□□□□ -2.18
ZNF394Q53GI3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
ZNF394Q53GI3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ZNF394Q53GI3 MIR450A1-201ENST00000362262 91 ntBASIC1.43□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.43□□□□□ -2.18
ZNF394Q53GI3 RNU1-119P-201ENST00000391122 165 ntBASIC1.43□□□□□ -2.18
ZNF394Q53GI3 RNU6-158P-201ENST00000517104 100 ntBASIC1.43□□□□□ -2.18
ZNF394Q53GI3 AC090897.1-201ENST00000580909 226 ntBASIC1.43□□□□□ -2.18
ZNF394Q53GI3 RNY1P10-201ENST00000363268 113 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 MIR520F-201ENST00000384824 87 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 MIR548G-201ENST00000408442 89 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 AC015818.7-201ENST00000428754 109 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 RNU7-56P-201ENST00000458744 62 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 SNORA25.16-201ENST00000516741 121 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 RNU6-537P-201ENST00000517277 103 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 MTND5P40-201ENST00000559945 246 ntBASIC1.42□□□□□ -2.18
ZNF394Q53GI3 MIR4500-201ENST00000579472 76 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms