Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR4724-201ENST00000579485 89 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 MIR1255B2-201ENST00000408618 67 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 ELOCP20-201ENST00000422460 345 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 RNU6-276P-201ENST00000516114 96 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 SNORA18.6-201ENST00000516792 115 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.45□□□□□ -2.64
PRKDCP78527 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 RNU6-90P-201ENST00000606352 106 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 AP001506.1-201ENST00000615444 211 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 U6.96-201ENST00000636425 70 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 RNU6-524P-201ENST00000384270 107 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 MIR4464-201ENST00000580818 92 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 MIR5197-201ENST00000583721 112 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 RNU4-68P-201ENST00000364314 141 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 AC092747.3-201ENST00000603769 301 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 MIR367-201ENST00000362299 68 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 RNU6-801P-201ENST00000364087 105 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 MIR548E-201ENST00000408287 88 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 AL009048.1-201ENST00000450437 298 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 SNORD5.1-201ENST00000458800 75 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 AC120024.2-201ENST00000576526 175 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 U6.100-201ENST00000636230 99 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 RNU6-95P-201ENST00000384697 107 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.46□□□□□ -2.64
PRKDCP78527 MIR4696-201ENST00000581431 70 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 AL365205.2-201ENST00000594586 68 ntBASIC-1.46□□□□□ -2.64
PRKDCP78527 RNU6-664P-201ENST00000362381 107 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 AC060780.3-201ENST00000589464 80 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 MTND2P39-201ENST00000457230 764 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 RNU7-24P-201ENST00000458867 62 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 AC083798.1-201ENST00000472671 131 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.47□□□□□ -2.64
PRKDCP78527 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.47□□□□□ -2.64
PRKDCP78527 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.47□□□□□ -2.65
PRKDCP78527 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.47□□□□□ -2.65
PRKDCP78527 Z83846.1-201ENST00000446798 265 ntBASIC-1.47□□□□□ -2.65
PRKDCP78527 MIR5693-201ENST00000577722 73 ntBASIC-1.47□□□□□ -2.65
PRKDCP78527 RNU6-157P-201ENST00000383957 107 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 RNU6-472P-201ENST00000384299 107 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 AC006386.1-201ENST00000619436 415 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 MIR6888-201ENST00000621977 67 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 MTCO2P4-201ENST00000517968 247 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 FTX_4.1-201ENST00000616291 147 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 PISRT1.1-201ENST00000616930 107 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.48□□□□□ -2.65
PRKDCP78527 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.48□□□□□ -2.65
PRKDCP78527 RNU6-874P-201ENST00000362390 105 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 SEPT14P8-201ENST00000508026 178 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 Z69908.1-201ENST00000622603 247 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 AP001542.1-201ENST00000591314 200 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 RNU6-695P-201ENST00000391157 104 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 AC021443.1-201ENST00000604478 211 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 AC005014.2-201ENST00000607795 599 ntBASIC-1.49□□□□□ -2.65
PRKDCP78527 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 SNORD27-201ENST00000363981 72 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 RNU6-102P-201ENST00000384485 104 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 AC113618.1-201ENST00000416747 285 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 SNRPGP8-201ENST00000454064 226 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 ZNF519P2-201ENST00000557032 169 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 MIR5683-201ENST00000636514 76 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 RNU7-110P-201ENST00000516891 62 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 RNU6-570P-201ENST00000517051 105 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 MIR3672-201ENST00000584290 82 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 MTND1P2-201ENST00000430604 821 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 RNU7-106P-201ENST00000459514 67 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 RNU6-720P-201ENST00000516363 108 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 AC103591.3-201ENST00000608684 209 ntBASIC-1.5□□□□□ -2.65
PRKDCP78527 AL035461.1-201ENST00000421490 332 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNA5SP401-201ENST00000515920 127 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 AC022079.1-201ENST00000621546 602 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 AC090617.10-201ENST00000624308 134 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU6-500P-201ENST00000362349 107 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU6-559P-201ENST00000516151 98 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 MIR4659A-201ENST00000580269 81 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU6-763P-201ENST00000390865 106 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU2-31P-201ENST00000516954 155 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 SNORA40.3-201ENST00000390964 122 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU6-332P-201ENST00000391193 108 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms