Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 RNU6-169P-201ENST00000365336 107 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 SNORD63B-201ENST00000411005 70 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 RNU2-55P-201ENST00000411146 174 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 PMCHL1-202ENST00000423102 261 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 MTND2P22-201ENST00000444325 1033 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.66□□□□□ -2.51
ABCA4P78363 RNU6-911P-201ENST00000516523 104 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 AC006927.3-201ENST00000638789 384 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 SNORD115-20-201ENST00000365099 82 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 MTATP6P19-201ENST00000413797 659 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 RBMX2P4-201ENST00000441256 376 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.66□□□□□ -2.52
ABCA4P78363 FGF7P6-202ENST00000451282 293 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 MTND4P17-201ENST00000470444 350 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 RNA5SP147-201ENST00000516493 109 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 RNU6-759P-201ENST00000516740 103 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 MIR3129-201ENST00000581095 76 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 AC025521.1-201ENST00000621624 286 ntBASIC-0.66□□□□□ -2.52
ABCA4P78363 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
ABCA4P78363 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-254P-201ENST00000363377 107 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 SNORD115-33-201ENST00000363723 82 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-647P-201ENST00000364243 107 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU4-68P-201ENST00000364314 141 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-690P-201ENST00000365242 106 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 SNORD38.2-201ENST00000384470 69 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-695P-201ENST00000391157 104 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR548Q-201ENST00000408404 100 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR548H1-201ENST00000408610 102 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-90P-201ENST00000606352 106 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 AC021613.1-201ENST00000623880 111 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-931P-201ENST00000363850 107 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNY3P11-201ENST00000364153 102 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MT-TW-201ENST00000387382 68 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU4-88P-201ENST00000411220 86 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU7-48P-201ENST00000458875 63 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-273P-201ENST00000516937 96 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 AC144568.1-201ENST00000520139 137 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR4500-201ENST00000579472 76 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR4696-201ENST00000581431 70 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR5188-201ENST00000583467 113 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 MIR548AM-201ENST00000584298 74 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 AC019193.3-201ENST00000609144 554 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 AC091932.4-201ENST00000623386 200 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 TPTEP1-208ENST00000636884 213 ntBASIC-0.67□□□□□ -2.52
ABCA4P78363 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-102P-201ENST00000384485 104 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-456P-201ENST00000384493 107 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-95P-201ENST00000384697 107 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 SNORD78.2-201ENST00000391076 69 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 MTND4P28-201ENST00000426217 387 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 snoU13.17-201ENST00000458802 104 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNY4-201ENST00000516507 96 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.68□□□□□ -2.52
ABCA4P78363 AL513043.2-201ENST00000573941 143 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 MIR466-201ENST00000580653 84 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-260P-201ENST00000384092 107 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-466P-201ENST00000391224 103 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-732P-201ENST00000516033 103 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 U7.5-201ENST00000517224 61 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 RN7SKP295-201ENST00000517264 153 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 AC005014.3-201ENST00000605985 190 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 MIR6128-201ENST00000615528 109 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 AC097520.1-201ENST00000624435 385 ntBASIC-0.68□□□□□ -2.52
ABCA4P78363 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.69□□□□□ -2.52
ABCA4P78363 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.69□□□□□ -2.52
ABCA4P78363 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.69□□□□□ -2.52
ABCA4P78363 RNU6-246P-201ENST00000384702 107 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms