Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIR513C-201ENST00000401352 84 ntBASIC-4.79□□□□□ -3.18
RPL39P62891 CYCSP46-201ENST00000423569 204 ntBASIC-4.79□□□□□ -3.18
RPL39P62891 RNU7-24P-201ENST00000458867 62 ntBASIC-4.79□□□□□ -3.18
RPL39P62891 SCARNA24.1-201ENST00000516465 137 ntBASIC-4.79□□□□□ -3.18
RPL39P62891 SCARNA24.2-201ENST00000516968 130 ntBASIC-4.79□□□□□ -3.18
RPL39P62891 RNU6-696P-201ENST00000390834 107 ntBASIC-4.8□□□□□ -3.18
RPL39P62891 AL021921.1-201ENST00000442774 93 ntBASIC-4.8□□□□□ -3.18
RPL39P62891 AC073415.1-201ENST00000449240 153 ntBASIC-4.8□□□□□ -3.18
RPL39P62891 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-4.8□□□□□ -3.18
RPL39P62891 AC013734.1-201ENST00000619329 111 ntBASIC-4.8□□□□□ -3.18
RPL39P62891 Y_RNA.66-201ENST00000362862 102 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 Y_RNA.101-201ENST00000363154 102 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 MIR509-1-201ENST00000385265 94 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 MIR509-2-201ENST00000390724 91 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 MRPS36P3-201ENST00000519284 130 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-4.81□□□□□ -3.18
RPL39P62891 MIR376B-201ENST00000614515 100 ntBASIC-4.81□□□□□ -3.18
RPL39P62891 Y_RNA.105-201ENST00000363182 111 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 Y_RNA.367-201ENST00000365544 101 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 RNU6-1307P-201ENST00000391012 103 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 snoU13.17-201ENST00000458802 104 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-4.82□□□□□ -3.18
RPL39P62891 MIR548AG1-201ENST00000579932 66 ntBASIC-4.82□□□□□ -3.18
RPL39P62891 RNU6-682P-201ENST00000363843 106 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 MTCO2P30-201ENST00000503662 364 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 MTATP6P15-201ENST00000527233 835 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 AC005357.1-201ENST00000588399 301 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 DLEU2_3.1-201ENST00000620005 73 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 SEPT14P19-203ENST00000633205 211 ntBASIC-4.83□□□□□ -3.18
RPL39P62891 SNORD18C-201ENST00000362704 69 ntBASIC-4.84□□□□□ -3.18
RPL39P62891 MIR1270-201ENST00000459320 83 ntBASIC-4.84□□□□□ -3.18
RPL39P62891 Y_RNA.690-201ENST00000516603 95 ntBASIC-4.84□□□□□ -3.18
RPL39P62891 MIR4703-201ENST00000577728 79 ntBASIC-4.84□□□□□ -3.18
RPL39P62891 U6.97-201ENST00000636904 101 ntBASIC-4.84□□□□□ -3.18
RPL39P62891 RNU6-1214P-201ENST00000363650 109 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 RNU6-596P-201ENST00000365395 98 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 AL590004.1-201ENST00000405321 300 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 AC098826.2-201ENST00000452011 651 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 AP002392.1-201ENST00000537692 208 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 AL606534.2-204ENST00000635008 178 ntBASIC-4.85□□□□□ -3.19
RPL39P62891 Y_RNA.143-201ENST00000363520 106 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 Y_RNA.405-201ENST00000383979 100 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 RNU6-260P-201ENST00000384092 107 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 Y_RNA.451-201ENST00000384200 100 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 Y_RNA.524-201ENST00000384564 100 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 Y_RNA.561-201ENST00000384694 100 ntBASIC-4.86□□□□□ -3.19
RPL39P62891 RNU6-191P-201ENST00000516295 94 ntBASIC-4.87□□□□□ -3.19
RPL39P62891 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 RNU6-433P-201ENST00000363216 104 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 RNU6-832P-201ENST00000363319 107 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 RNU6-207P-201ENST00000384137 107 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 SNORA72.4-201ENST00000384174 132 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 SNORD115.1-201ENST00000391109 76 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 RNU2-4P-201ENST00000606190 192 ntBASIC-4.88□□□□□ -3.19
RPL39P62891 Y_RNA.106-201ENST00000363189 100 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 Y_RNA.173-201ENST00000363776 113 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 Y_RNA.394-201ENST00000383942 103 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-4.89□□□□□ -3.19
RPL39P62891 FGF7P7-201ENST00000514120 227 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 RNU6-155P-201ENST00000516347 100 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 RNA5SP147-201ENST00000516493 109 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 RNU6-1220P-201ENST00000517126 108 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 MIR3129-201ENST00000581095 76 ntBASIC-4.89□□□□□ -3.19
RPL39P62891 RNU6-470P-201ENST00000515954 104 ntBASIC-4.9□□□□□ -3.19
RPL39P62891 RNU7-2P-201ENST00000516096 62 ntBASIC-4.9□□□□□ -3.19
RPL39P62891 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-4.9□□□□□ -3.19
RPL39P62891 MIRLET7A2-201ENST00000362105 72 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 MIR16-2-201ENST00000362117 81 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 RNU6-236P-201ENST00000363886 106 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 RNU6-879P-201ENST00000364328 108 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 MIR521-2-201ENST00000384818 87 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 MRPL42P2-201ENST00000403169 426 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 SNORD27.1-201ENST00000516319 72 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 Y_RNA.706-201ENST00000516933 99 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 MIR5692C2-201ENST00000577959 77 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 AL132765.2-201ENST00000610812 351 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 AC073869.6-201ENST00000640656 341 ntBASIC-4.91□□□□□ -3.2
RPL39P62891 Y_RNA.159-201ENST00000363674 87 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 RNU7-141P-201ENST00000459304 62 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 RNU6-1089P-201ENST00000516473 104 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 RNU6-971P-201ENST00000516920 106 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 RNA5SP106-201ENST00000517274 100 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 MIR5696-201ENST00000578474 85 ntBASIC-4.92□□□□□ -3.2
RPL39P62891 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.93□□□□□ -3.2
RPL39P62891 Y_RNA.618-201ENST00000410949 107 ntBASIC-4.93□□□□□ -3.2
RPL39P62891 RNU6-408P-201ENST00000515910 100 ntBASIC-4.93□□□□□ -3.2
RPL39P62891 RNU6-1262P-201ENST00000516217 96 ntBASIC-4.93□□□□□ -3.2
RPL39P62891 Y_RNA.304-201ENST00000365011 112 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 RNU6-1000P-201ENST00000391066 106 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 RNU6-1111P-201ENST00000391118 107 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 MTND1P2-201ENST00000430604 821 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 UBE2V1P7-201ENST00000446395 340 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 MIR4790-201ENST00000577799 79 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 AC009779.6-201ENST00000603972 165 ntBASIC-4.94□□□□□ -3.2
RPL39P62891 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.95□□□□□ -3.2
RPL39P62891 SNORD113-3-201ENST00000364830 72 ntBASIC-4.95□□□□□ -3.2
RPL39P62891 Y_RNA.381-201ENST00000365666 102 ntBASIC-4.95□□□□□ -3.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms