Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR516A1-201ENST00000385033 90 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 SNORA26.9-201ENST00000391322 122 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 MIR1302-7-201ENST00000408841 72 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 AC015818.7-201ENST00000428754 109 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 AL133373.1-201ENST00000497098 94 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 RNU6-922P-201ENST00000516753 99 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 RNU6-303P-201ENST00000517091 106 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 MIR3192-201ENST00000584920 77 ntBASIC2.86□□□□□ -1.95
PRIM1P49642 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
PRIM1P49642 RNU6-1108P-201ENST00000516308 104 ntBASIC2.85□□□□□ -1.95
PRIM1P49642 RNU2-19P-201ENST00000517288 84 ntBASIC2.85□□□□□ -1.95
PRIM1P49642 RNU6-208P-201ENST00000362431 107 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 RNU5F-1-201ENST00000362507 117 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 RNU1-17P-201ENST00000363022 152 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 AC125388.1-201ENST00000459631 156 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 RNU6-448P-201ENST00000517052 107 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 MIR3134-201ENST00000579433 74 ntBASIC2.84□□□□□ -1.95
PRIM1P49642 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.84□□□□□ -1.95
PRIM1P49642 RNA5SP292-201ENST00000390974 118 ntBASIC2.83□□□□□ -1.96
PRIM1P49642 SCARNA18B-201ENST00000458806 135 ntBASIC2.83□□□□□ -1.96
PRIM1P49642 RNU7-193P-201ENST00000516723 65 ntBASIC2.83□□□□□ -1.96
PRIM1P49642 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PRIM1P49642 RNY4P3-201ENST00000365254 95 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 MIR518E-201ENST00000385252 88 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 MIR519A1-201ENST00000385257 85 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 RNU6-75P-201ENST00000515944 104 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 RNA5SP200-201ENST00000516360 103 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 MIR548H5-201ENST00000580314 60 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 Y_RNA.788-201ENST00000622394 112 ntBASIC2.82□□□□□ -1.96
PRIM1P49642 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
PRIM1P49642 AL596028.1-201ENST00000326971 197 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 SNORA3A-201ENST00000364113 130 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 MIR524-201ENST00000385242 87 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 MIR5194-201ENST00000582634 120 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 MIR6845-201ENST00000613182 61 ntBASIC2.81□□□□□ -1.96
PRIM1P49642 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.81□□□□□ -1.96
PRIM1P49642 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRIM1P49642 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PRIM1P49642 SNORA67.1-201ENST00000364749 141 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 MIR635-201ENST00000384830 98 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 MIR520H-201ENST00000385126 88 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 RNU6-205P-201ENST00000390858 107 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 SNORD63B-201ENST00000411005 70 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 RNU6-634P-201ENST00000459134 106 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 AC005908.1-201ENST00000468701 347 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 RNU6-70P-201ENST00000516438 60 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 AC015688.6-201ENST00000577737 104 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 SNRPGP19-201ENST00000603826 189 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.8□□□□□ -1.96
PRIM1P49642 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRIM1P49642 MIR101-2-201ENST00000362195 79 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 SNORD93-201ENST00000408813 74 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 RNA5SP82-201ENST00000516707 92 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 YWHAEP2-201ENST00000580066 112 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 MIR4491-201ENST00000581087 68 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 YWHAEP3-201ENST00000582767 121 ntBASIC2.79□□□□□ -1.96
PRIM1P49642 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRIM1P49642 RNU6-580P-201ENST00000365159 107 ntBASIC2.78□□□□□ -1.96
PRIM1P49642 RNU6-531P-201ENST00000516694 104 ntBASIC2.78□□□□□ -1.96
PRIM1P49642 RNU6-1015P-201ENST00000517121 99 ntBASIC2.78□□□□□ -1.96
PRIM1P49642 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
PRIM1P49642 RNU6-132P-201ENST00000383863 107 ntBASIC2.77□□□□□ -1.97
PRIM1P49642 AC074348.1-201ENST00000426503 132 ntBASIC2.77□□□□□ -1.97
PRIM1P49642 MIR514B-201ENST00000516774 80 ntBASIC2.77□□□□□ -1.97
PRIM1P49642 AP003716.2-201ENST00000528260 108 ntBASIC2.77□□□□□ -1.97
PRIM1P49642 MIR6132-201ENST00000622083 109 ntBASIC2.77□□□□□ -1.97
PRIM1P49642 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PRIM1P49642 SNORA25.3-201ENST00000363205 127 ntBASIC2.76□□□□□ -1.97
PRIM1P49642 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PRIM1P49642 AC055731.1-201ENST00000474387 401 ntBASIC2.76□□□□□ -1.97
PRIM1P49642 MIR6516-201ENST00000630554 81 ntBASIC2.76□□□□□ -1.97
PRIM1P49642 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRIM1P49642 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
PRIM1P49642 MIR103A2-201ENST00000362154 78 ntBASIC2.75□□□□□ -1.97
PRIM1P49642 SNORD33-201ENST00000362761 85 ntBASIC2.75□□□□□ -1.97
PRIM1P49642 RNU6-587P-201ENST00000391282 106 ntBASIC2.75□□□□□ -1.97
PRIM1P49642 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PRIM1P49642 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
PRIM1P49642 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.75□□□□□ -1.97
PRIM1P49642 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.75□□□□□ -1.97
PRIM1P49642 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.75□□□□□ -1.97
PRIM1P49642 Y_RNA.56-201ENST00000362798 112 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 RNA5SP264-201ENST00000363115 107 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 Y_RNA.239-201ENST00000364444 113 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 RNU1-36P-201ENST00000365130 165 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 Y_RNA.588-201ENST00000391254 102 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 RNU2-59P-201ENST00000410482 191 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 RPS27P16-201ENST00000425758 201 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 RNU7-106P-201ENST00000459514 67 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 MIR4498-201ENST00000577599 66 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 MIR8074-201ENST00000615081 81 ntBASIC2.74□□□□□ -1.97
PRIM1P49642 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.74□□□□□ -1.97
PRIM1P49642 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRIM1P49642 RNU6-681P-201ENST00000364012 104 ntBASIC2.73□□□□□ -1.97
PRIM1P49642 SNORD100-201ENST00000408573 76 ntBASIC2.73□□□□□ -1.97
PRIM1P49642 RNU6-947P-201ENST00000516264 106 ntBASIC2.73□□□□□ -1.97
PRIM1P49642 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.73□□□□□ -1.97
PRIM1P49642 Y_RNA.783-201ENST00000613546 102 ntBASIC2.73□□□□□ -1.97
PRIM1P49642 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 260.6 ms