Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNA5SP133-201ENST00000363368 119 ntBASIC0.77□□□□□ -2.29
CENPAP49450 RNU6-616P-201ENST00000384353 107 ntBASIC0.77□□□□□ -2.29
CENPAP49450 MIR573-201ENST00000384964 99 ntBASIC0.77□□□□□ -2.29
CENPAP49450 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.77□□□□□ -2.29
CENPAP49450 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
CENPAP49450 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CENPAP49450 SNORA25.16-201ENST00000516741 121 ntBASIC0.77□□□□□ -2.29
CENPAP49450 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.77□□□□□ -2.29
CENPAP49450 MIR8066-201ENST00000617280 78 ntBASIC0.77□□□□□ -2.29
CENPAP49450 Y_RNA.525-201ENST00000384570 113 ntBASIC0.76□□□□□ -2.29
CENPAP49450 MIR206-201ENST00000384872 86 ntBASIC0.76□□□□□ -2.29
CENPAP49450 AC096949.1-201ENST00000412047 152 ntBASIC0.76□□□□□ -2.29
CENPAP49450 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
CENPAP49450 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
CENPAP49450 AC090897.1-201ENST00000580909 226 ntBASIC0.76□□□□□ -2.29
CENPAP49450 AC087741.2-201ENST00000619415 172 ntBASIC0.76□□□□□ -2.29
CENPAP49450 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
CENPAP49450 Y_RNA.448-201ENST00000384185 108 ntBASIC0.75□□□□□ -2.29
CENPAP49450 Y_RNA.630-201ENST00000411370 108 ntBASIC0.75□□□□□ -2.29
CENPAP49450 RPS29P1-201ENST00000465274 159 ntBASIC0.75□□□□□ -2.29
CENPAP49450 RNU7-2P-201ENST00000516096 62 ntBASIC0.75□□□□□ -2.29
CENPAP49450 RNU4-58P-201ENST00000363192 141 ntBASIC0.74□□□□□ -2.29
CENPAP49450 Y_RNA.218-201ENST00000364218 104 ntBASIC0.74□□□□□ -2.29
CENPAP49450 MIRLET7F2-201ENST00000385277 83 ntBASIC0.74□□□□□ -2.29
CENPAP49450 RNU6-1321P-201ENST00000390905 107 ntBASIC0.74□□□□□ -2.29
CENPAP49450 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
CENPAP49450 RNU6-735P-201ENST00000410612 107 ntBASIC0.74□□□□□ -2.29
CENPAP49450 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
CENPAP49450 MIR3612-201ENST00000579753 87 ntBASIC0.74□□□□□ -2.29
CENPAP49450 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
CENPAP49450 Y_RNA.119-201ENST00000363301 96 ntBASIC0.73□□□□□ -2.29
CENPAP49450 RNY4P6-201ENST00000363667 96 ntBASIC0.73□□□□□ -2.29
CENPAP49450 RNU6-865P-201ENST00000364772 107 ntBASIC0.73□□□□□ -2.29
CENPAP49450 RNA5SP117-201ENST00000365294 118 ntBASIC0.73□□□□□ -2.29
CENPAP49450 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
CENPAP49450 MIR548D2-201ENST00000384955 97 ntBASIC0.73□□□□□ -2.29
CENPAP49450 RNU7-48P-201ENST00000458875 63 ntBASIC0.73□□□□□ -2.29
CENPAP49450 Y_RNA.697-201ENST00000516776 113 ntBASIC0.73□□□□□ -2.29
CENPAP49450 RNU6-765P-201ENST00000516916 99 ntBASIC0.73□□□□□ -2.29
CENPAP49450 AC138749.4-201ENST00000563970 127 ntBASIC0.73□□□□□ -2.29
CENPAP49450 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
CENPAP49450 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
CENPAP49450 Y_RNA.98-201ENST00000363109 102 ntBASIC0.72□□□□□ -2.29
CENPAP49450 SNORD115-35-201ENST00000365122 82 ntBASIC0.72□□□□□ -2.29
CENPAP49450 RNU6-959P-201ENST00000384671 107 ntBASIC0.72□□□□□ -2.29
CENPAP49450 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CENPAP49450 AC002350.1-201ENST00000490759 375 ntBASIC0.72□□□□□ -2.29
CENPAP49450 RNU6-1194P-201ENST00000516208 104 ntBASIC0.72□□□□□ -2.29
CENPAP49450 Y_RNA.773-201ENST00000607168 90 ntBASIC0.72□□□□□ -2.29
CENPAP49450 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CENPAP49450 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
CENPAP49450 MIR101-2-201ENST00000362195 79 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD115-19-201ENST00000363098 82 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD115-18-201ENST00000363293 82 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD115-17-201ENST00000364612 82 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNY1P2-201ENST00000364820 117 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD116-14-201ENST00000383894 92 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD116-17-201ENST00000383929 92 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD116-15-201ENST00000384445 92 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD116-19-201ENST00000384729 92 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNU6-1333P-201ENST00000516162 93 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNU6-659P-201ENST00000516454 104 ntBASIC0.71□□□□□ -2.3
CENPAP49450 RNA5SP480-201ENST00000516840 109 ntBASIC0.71□□□□□ -2.3
CENPAP49450 AP003327.1-201ENST00000529684 127 ntBASIC0.71□□□□□ -2.3
CENPAP49450 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
CENPAP49450 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR7-2-201ENST00000384970 110 ntBASIC0.7□□□□□ -2.3
CENPAP49450 SNORD100-201ENST00000408573 76 ntBASIC0.7□□□□□ -2.3
CENPAP49450 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
CENPAP49450 Y_RNA.649-201ENST00000459077 103 ntBASIC0.7□□□□□ -2.3
CENPAP49450 RNU6-521P-201ENST00000516663 105 ntBASIC0.7□□□□□ -2.3
CENPAP49450 Y_RNA.712-201ENST00000517011 92 ntBASIC0.7□□□□□ -2.3
CENPAP49450 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
CENPAP49450 MTND5P34-201ENST00000568888 325 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR4500-201ENST00000579472 76 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR1255B1-201ENST00000636325 63 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR3914-2-201ENST00000637339 95 ntBASIC0.7□□□□□ -2.3
CENPAP49450 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
CENPAP49450 Y_RNA.127-201ENST00000363386 109 ntBASIC0.69□□□□□ -2.3
CENPAP49450 Y_RNA.328-201ENST00000365208 113 ntBASIC0.69□□□□□ -2.3
CENPAP49450 RNU6-81P-201ENST00000365608 104 ntBASIC0.69□□□□□ -2.3
CENPAP49450 RNU6-535P-201ENST00000384722 107 ntBASIC0.69□□□□□ -2.3
CENPAP49450 RNU6-1307P-201ENST00000391012 103 ntBASIC0.69□□□□□ -2.3
CENPAP49450 MIR3910-1-201ENST00000580936 111 ntBASIC0.69□□□□□ -2.3
CENPAP49450 PVT1_3.1-201ENST00000620853 95 ntBASIC0.69□□□□□ -2.3
CENPAP49450 AP001362.1-201ENST00000625165 124 ntBASIC0.69□□□□□ -2.3
CENPAP49450 U6.95-201ENST00000636931 70 ntBASIC0.69□□□□□ -2.3
CENPAP49450 AC132825.6-201ENST00000638861 357 ntBASIC0.69□□□□□ -2.3
CENPAP49450 Y_RNA.344-201ENST00000365381 112 ntBASIC0.68□□□□□ -2.3
CENPAP49450 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
CENPAP49450 Y_RNA.536-201ENST00000384621 113 ntBASIC0.68□□□□□ -2.3
CENPAP49450 MIR548A3-201ENST00000385297 97 ntBASIC0.68□□□□□ -2.3
CENPAP49450 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
CENPAP49450 SNORA7.5-201ENST00000410672 110 ntBASIC0.68□□□□□ -2.3
CENPAP49450 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
CENPAP49450 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms