Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR3121-201ENST00000579680 77 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 AC062037.2-201ENST00000610137 73 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 U6.106-201ENST00000636360 105 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RNU4-16P-201ENST00000364737 141 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RNU6-643P-201ENST00000384018 107 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 MIR145-201ENST00000384967 88 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RNU2-38P-201ENST00000410856 79 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RNU7-159P-201ENST00000459284 62 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RPL39P34-201ENST00000477141 156 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RNU7-123P-201ENST00000515911 60 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 RN7SKP12-201ENST00000516275 143 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.04□□□□□ -2.42
SCN4AP35499 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 SNORD114-31-201ENST00000363219 75 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 SNORD95.1-201ENST00000364099 68 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 RNA5SP245-201ENST00000364239 121 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 RNU6-690P-201ENST00000365242 106 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 MIR548L-201ENST00000408303 86 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 MIR1270-201ENST00000459320 83 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 RNU6-327P-201ENST00000516270 127 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 U2.14-201ENST00000615943 113 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 AC021753.1-201ENST00000635724 168 ntBASIC-0.05□□□□□ -2.42
SCN4AP35499 SNORA22.1-201ENST00000362701 134 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 RNU6-652P-201ENST00000365488 107 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 MIR206-201ENST00000384872 86 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.06□□□□□ -2.42
SCN4AP35499 RNA5SP227-201ENST00000516184 113 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 MIR4645-201ENST00000583158 77 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 MIR548AD-201ENST00000584780 82 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 AC105081.1-201ENST00000617727 106 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 uc_338.10-201ENST00000621872 182 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 PCNPP3-201ENST00000393579 471 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 RNU6-240P-201ENST00000516098 97 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 RNU2-35P-201ENST00000516446 142 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 MIR548H5-201ENST00000580314 60 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 AC141273.2-201ENST00000618989 130 ntBASIC-0.06□□□□□ -2.42
SCN4AP35499 RNY1P2-201ENST00000364820 117 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 SNORA72.6-201ENST00000384520 129 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 MIR568-201ENST00000385036 95 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 RNA5SP144-201ENST00000410846 116 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 MTCYBP9-201ENST00000431021 303 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
SCN4AP35499 MIR4308-201ENST00000580634 81 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 U6.109-201ENST00000636749 87 ntBASIC-0.07□□□□□ -2.42
SCN4AP35499 SNORA63-201ENST00000363450 132 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RNU6-46P-201ENST00000383860 107 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR548F4-201ENST00000408515 105 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR3128-201ENST00000581957 66 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RNU7-10P-201ENST00000607194 63 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 U4.1-201ENST00000620349 87 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR376A2-201ENST00000636782 80 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR6841-201ENST00000637129 72 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR371B-201ENST00000638082 66 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RPS29P8-201ENST00000445109 171 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 MIR3149-201ENST00000584629 83 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 uc_338.28-201ENST00000612082 187 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
SCN4AP35499 RNA5SP128-201ENST00000365305 116 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 RNU6-30P-201ENST00000384561 107 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 RNU6-918P-201ENST00000391219 106 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 AC244505.6-201ENST00000452829 130 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 RNU1-29P-201ENST00000606574 126 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 MIR7107-201ENST00000611489 80 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
SCN4AP35499 RNU6-508P-201ENST00000363231 103 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 RN7SKP19-201ENST00000516016 252 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 MIR3925-201ENST00000584674 77 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 RNU6-269P-201ENST00000391077 97 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 AL137067.1-201ENST00000615933 120 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 MIR8066-201ENST00000617280 78 ntBASIC-0.1□□□□□ -2.43
SCN4AP35499 MIR101-1-201ENST00000362265 75 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 SNORA63.5-201ENST00000363548 123 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.11□□□□□ -2.43
SCN4AP35499 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms