Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 SNORD116-21-201ENST00000384507 92 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 RNU6-476P-201ENST00000384726 107 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 MIR1257-201ENST00000408490 117 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 RNU6-977P-201ENST00000516411 103 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXD12P35452 MIR1255B1-201ENST00000636325 63 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 RNU6-834P-201ENST00000362367 110 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 RNU6-1290P-201ENST00000362957 109 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 Y_RNA.549-201ENST00000384657 102 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 MIR206-201ENST00000384872 86 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXD12P35452 MIR4676-201ENST00000583078 72 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXD12P35452 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.02□□□□□ -2.25
HOXD12P35452 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 SNORA63.5-201ENST00000363548 123 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 SNORD115-35-201ENST00000365122 82 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 MIR125B2-201ENST00000385128 89 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 MIR1827-201ENST00000408549 66 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.01□□□□□ -2.25
HOXD12P35452 RNU7-2P-201ENST00000516096 62 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 RNU6-521P-201ENST00000516663 105 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 AC133485.1-201ENST00000567176 124 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 MIR4679-2-201ENST00000578358 77 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.01□□□□□ -2.25
HOXD12P35452 MIR6129-201ENST00000616087 109 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 AL035470.1-201ENST00000622571 220 ntBASIC1.01□□□□□ -2.25
HOXD12P35452 Y_RNA.35-201ENST00000362601 101 ntBASIC1□□□□□ -2.25
HOXD12P35452 RNU6-403P-201ENST00000363163 104 ntBASIC1□□□□□ -2.25
HOXD12P35452 Y_RNA.273-201ENST00000364703 102 ntBASIC1□□□□□ -2.25
HOXD12P35452 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
HOXD12P35452 Y_RNA.448-201ENST00000384185 108 ntBASIC1□□□□□ -2.25
HOXD12P35452 RNU6-1321P-201ENST00000390905 107 ntBASIC1□□□□□ -2.25
HOXD12P35452 AC096949.1-201ENST00000412047 152 ntBASIC1□□□□□ -2.25
HOXD12P35452 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1□□□□□ -2.25
HOXD12P35452 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
HOXD12P35452 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
HOXD12P35452 MIR4491-201ENST00000581087 68 ntBASIC1□□□□□ -2.25
HOXD12P35452 AL136317.1-201ENST00000612653 226 ntBASIC1□□□□□ -2.25
HOXD12P35452 IST1-227ENST00000626438 126 ntTSL 5 BASIC1□□□□□ -2.25
HOXD12P35452 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU4-67P-201ENST00000364569 141 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-364P-201ENST00000384387 107 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-880P-201ENST00000384526 107 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-816P-201ENST00000390914 107 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1268P-201ENST00000391214 107 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1239P-201ENST00000391310 107 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-447P-201ENST00000410293 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1118P-201ENST00000410382 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1076P-201ENST00000410397 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-355P-201ENST00000410427 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-791P-201ENST00000410467 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-705P-201ENST00000410601 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1100P-201ENST00000410691 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-860P-201ENST00000410860 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU4-83P-201ENST00000410863 133 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1217P-201ENST00000411276 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-785P-201ENST00000411324 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 Y_RNA.629-201ENST00000411368 105 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RPL39P34-201ENST00000477141 156 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU6-1110P-201ENST00000516462 101 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 RNU7-156P-201ENST00000517214 74 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 CYP3A137P-201ENST00000562436 69 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 U6.90-201ENST00000614007 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 U6.70-201ENST00000620287 104 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 AL162726.3-218ENST00000636401 95 ntBASIC0.99□□□□□ -2.25
HOXD12P35452 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HOXD12P35452 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HOXD12P35452 RNU6-363P-201ENST00000362895 105 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 Y_RNA.507-201ENST00000384500 99 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 RNU6-429P-201ENST00000384582 108 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 MIR520F-201ENST00000384824 87 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 RNU6-1307P-201ENST00000391012 103 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 SNORA7.5-201ENST00000410672 110 ntBASIC0.98□□□□□ -2.25
HOXD12P35452 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
HOXD12P35452 Y_RNA.85-201ENST00000363014 111 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 Y_RNA.98-201ENST00000363109 102 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 RNA5SP133-201ENST00000363368 119 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 Y_RNA.155-201ENST00000363632 101 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 Y_RNA.309-201ENST00000365046 111 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 RNU6-409P-201ENST00000384114 104 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 SNORA72.6-201ENST00000384520 129 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HOXD12P35452 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 RNU7-56P-201ENST00000458744 62 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 RNU7-48P-201ENST00000458875 63 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 DEFB131E-201ENST00000532329 154 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 U6.109-201ENST00000636749 87 ntBASIC0.97□□□□□ -2.25
HOXD12P35452 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.97□□□□□ -2.25
HOXD12P35452 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
HOXD12P35452 RNU6-865P-201ENST00000364772 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 322.8 ms