Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-845P-201ENST00000362578 103 ntBASIC-2.46□□□□□ -2.8
CLIP1P30622 AL009048.1-201ENST00000450437 298 ntBASIC-2.46□□□□□ -2.8
CLIP1P30622 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.46□□□□□ -2.8
CLIP1P30622 RNU6-256P-201ENST00000516747 97 ntBASIC-2.46□□□□□ -2.8
CLIP1P30622 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 RNY1P6-201ENST00000384193 109 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 RNU6-763P-201ENST00000390865 106 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 MTND2P39-201ENST00000457230 764 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 RNU6-261P-201ENST00000459506 102 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.47□□□□□ -2.8
CLIP1P30622 RNU7-2P-201ENST00000516096 62 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.47□□□□□ -2.8
CLIP1P30622 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.47□□□□□ -2.8
CLIP1P30622 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.47□□□□□ -2.8
CLIP1P30622 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 RNU6-248P-201ENST00000410720 107 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 MTND2P31-201ENST00000512602 616 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 SCARNA15-202ENST00000516881 127 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 RNU6-980P-201ENST00000516925 103 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 MIR3913-1-201ENST00000577744 102 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 RNU6-89P-201ENST00000606519 100 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 AC092794.2-201ENST00000620933 563 ntBASIC-2.48□□□□□ -2.81
CLIP1P30622 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.48□□□□□ -2.81
CLIP1P30622 RNU6-235P-201ENST00000362644 107 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 SNORD116-11-201ENST00000383882 92 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 SNORD78.2-201ENST00000391076 69 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 SNORD42A-201ENST00000459584 64 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 AP002392.1-201ENST00000537692 208 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 AC084782.3-201ENST00000612282 578 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.49□□□□□ -2.81
CLIP1P30622 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 RNU6-695P-201ENST00000391157 104 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 RNA5SP153-201ENST00000516498 76 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 RNU6-118P-201ENST00000516552 102 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 RNU6-719P-201ENST00000516671 104 ntBASIC-2.5□□□□□ -2.81
CLIP1P30622 Y_RNA.231-201ENST00000364358 102 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 Y_RNA.389-201ENST00000383924 113 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 SNORD5.1-201ENST00000458800 75 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 MIR2053-201ENST00000459295 91 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 MIR34C-201ENST00000384831 77 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 U3.27-201ENST00000391237 200 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 RNU7-66P-201ENST00000459469 62 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 RNU6-191P-201ENST00000516295 94 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 AC013791.1-201ENST00000616619 62 ntBASIC-2.51□□□□□ -2.81
CLIP1P30622 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.52□□□□□ -2.81
CLIP1P30622 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.52□□□□□ -2.81
CLIP1P30622 MTCO2P19-201ENST00000427513 598 ntBASIC-2.52□□□□□ -2.81
CLIP1P30622 RNU2-35P-201ENST00000516446 142 ntBASIC-2.52□□□□□ -2.81
CLIP1P30622 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.52□□□□□ -2.81
CLIP1P30622 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-2.52□□□□□ -2.81
CLIP1P30622 RNU6-774P-201ENST00000363238 107 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 MIR181A1-201ENST00000385026 110 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 RNU4-69P-201ENST00000410677 143 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 RNU2-55P-201ENST00000411146 174 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-2.53□□□□□ -2.81
CLIP1P30622 RNU7-88P-201ENST00000458752 63 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 AC082651.2-201ENST00000496833 166 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 RNU6-570P-201ENST00000517051 105 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 AL512360.1-201ENST00000555346 234 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 MTATP6P25-201ENST00000574491 261 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 AC073869.6-201ENST00000640656 341 ntBASIC-2.53□□□□□ -2.81
CLIP1P30622 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.54□□□□□ -2.82
CLIP1P30622 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.54□□□□□ -2.82
CLIP1P30622 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.54□□□□□ -2.82
CLIP1P30622 Y_RNA.622-201ENST00000411091 108 ntBASIC-2.54□□□□□ -2.82
CLIP1P30622 SNRPGP8-201ENST00000454064 226 ntBASIC-2.54□□□□□ -2.82
CLIP1P30622 RNA5SP405-201ENST00000363059 114 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 RNU6-194P-201ENST00000363862 105 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 MIR496-201ENST00000385226 102 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.55□□□□□ -2.82
CLIP1P30622 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 ELOCP32-201ENST00000548625 324 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 CYP3A54P-201ENST00000566950 75 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 MIR548AM-201ENST00000584298 74 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 AC103591.3-201ENST00000608684 209 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 MIR6128-201ENST00000615528 109 ntBASIC-2.55□□□□□ -2.82
CLIP1P30622 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 RNU6-495P-201ENST00000362995 107 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 RNU6-841P-201ENST00000383872 107 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 RNU7-110P-201ENST00000516891 62 ntBASIC-2.56□□□□□ -2.82
CLIP1P30622 MIR4790-201ENST00000577799 79 ntBASIC-2.56□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 282.9 ms