Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR517B-201ENST00000385102 67 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 SNORD22.1-201ENST00000516331 125 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
COL4A5P29400 AL365205.2-201ENST00000594586 68 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 MIR382-201ENST00000637119 76 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 RNU6-718P-201ENST00000516166 105 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 RNU6-720P-201ENST00000516363 108 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 AP000676.1-201ENST00000533307 52 ntBASIC-0.84□□□□□ -2.54
COL4A5P29400 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 RNU6-119P-201ENST00000364882 107 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 RNU6-326P-201ENST00000365480 107 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 SNORA63.7-201ENST00000365579 123 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 SNORD115-46-201ENST00000390982 71 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 RNU7-48P-201ENST00000458875 63 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 SNORD116-25-201ENST00000516517 92 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 RNU6-570P-201ENST00000517051 105 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 MIR4770-201ENST00000579149 58 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 AC006504.6-201ENST00000590142 199 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 SNORD58B-201ENST00000607313 66 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 AC084781.2-201ENST00000615568 161 ntBASIC-0.85□□□□□ -2.55
COL4A5P29400 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 AC016907.1-201ENST00000419483 435 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.86□□□□□ -2.55
COL4A5P29400 MTND4P17-201ENST00000470444 350 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 AC022137.1-201ENST00000483735 151 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 MIR5591-201ENST00000578248 65 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 AC090574.1-201ENST00000623186 233 ntBASIC-0.86□□□□□ -2.55
COL4A5P29400 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 HLA-S-202ENST00000425174 53 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 MTND5P40-201ENST00000559945 246 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.87□□□□□ -2.55
COL4A5P29400 RNU1-115P-201ENST00000365329 160 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 MIR8485-201ENST00000401372 91 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AC093423.1-201ENST00000440817 142 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 RNU6-453P-201ENST00000516819 85 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.88□□□□□ -2.55
COL4A5P29400 MIR4460-201ENST00000577862 86 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AC138207.3-201ENST00000585289 166 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AL008718.3-201ENST00000610217 321 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AC084782.3-201ENST00000612282 578 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AC022079.1-201ENST00000621546 602 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 MIR1246-201ENST00000636535 73 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 RNU6-662P-201ENST00000384253 104 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 RNU6-154P-201ENST00000384306 106 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 MIR519E-201ENST00000385075 84 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.88□□□□□ -2.55
COL4A5P29400 AC011603.4-201ENST00000611325 277 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.88□□□□□ -2.55
COL4A5P29400 UBE2WP1-201ENST00000362030 340 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 SNORD81.2-201ENST00000365153 76 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 SNORD116-2-201ENST00000384274 95 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 SNORD116-6-201ENST00000384711 96 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 MIR624-201ENST00000385217 97 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 SNORD63B-201ENST00000411005 70 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 RNU6-130P-201ENST00000411112 103 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 RNU7-195P-201ENST00000458793 62 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 RNU7-137P-201ENST00000516788 62 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 AC093783.1-201ENST00000612976 329 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 AC090971.5-201ENST00000621102 293 ntBASIC-0.89□□□□□ -2.55
COL4A5P29400 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 RNU4-24P-201ENST00000364565 139 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 RNY4P7-201ENST00000364600 96 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 RNU6-211P-201ENST00000384047 107 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 MIR616-201ENST00000385293 97 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 MIR216B-201ENST00000390186 82 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 AL603914.1-201ENST00000401964 204 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 AC244090.1-201ENST00000441884 93 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.9□□□□□ -2.55
COL4A5P29400 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms