Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU7-102P-201ENST00000458948 62 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 RPL39P34-201ENST00000477141 156 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 MIR6082-201ENST00000613604 109 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 MIR8066-201ENST00000617280 78 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 Y_RNA.42-201ENST00000362660 108 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 RNA5SP133-201ENST00000363368 119 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 MIR548A1-201ENST00000385041 97 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 MIR520H-201ENST00000385126 88 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HLA-DOBP13765 RNU6-1194P-201ENST00000516208 104 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 RNA5SP102-201ENST00000516865 106 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 AC138749.4-201ENST00000563970 127 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.77□□□□□ -2.29
HLA-DOBP13765 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 MIR1255B1-201ENST00000636325 63 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 U6.109-201ENST00000636749 87 ntBASIC0.77□□□□□ -2.29
HLA-DOBP13765 Y_RNA.13-201ENST00000362403 112 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 Y_RNA.85-201ENST00000363014 111 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU4-58P-201ENST00000363192 141 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNY1P10-201ENST00000363268 113 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU4-67P-201ENST00000364569 141 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-1187P-201ENST00000364771 110 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-865P-201ENST00000364772 107 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 Y_RNA.309-201ENST00000365046 111 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 Y_RNA.328-201ENST00000365208 113 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-1144P-201ENST00000384247 104 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 SNORA72.6-201ENST00000384520 129 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-880P-201ENST00000384526 107 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-476P-201ENST00000384726 107 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 MIR1912-201ENST00000410389 80 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-1064P-201ENST00000410626 104 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 RNU6-521P-201ENST00000516663 105 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 AP003327.1-201ENST00000529684 127 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 DEFB131E-201ENST00000532329 154 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 MTND5P34-201ENST00000568888 325 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 AP001362.1-201ENST00000625165 124 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 AL162726.3-218ENST00000636401 95 ntBASIC0.76□□□□□ -2.29
HLA-DOBP13765 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 RNU6-1056P-201ENST00000383996 107 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 SNORD116-21-201ENST00000384507 92 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.75□□□□□ -2.29
HLA-DOBP13765 SNORA25.16-201ENST00000516741 121 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 AC090897.1-201ENST00000580909 226 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 AC008608.1-201ENST00000603910 127 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
HLA-DOBP13765 Y_RNA.119-201ENST00000363301 96 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 Y_RNA.273-201ENST00000364703 102 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-409P-201ENST00000384114 104 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 MIR573-201ENST00000384964 99 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-816P-201ENST00000390914 107 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-1307P-201ENST00000391012 103 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-1268P-201ENST00000391214 107 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-1239P-201ENST00000391310 107 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 MIR548I2-201ENST00000408348 149 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
HLA-DOBP13765 RPL39P28-201ENST00000465655 155 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 RNU6-412P-201ENST00000516434 106 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 AL035470.1-201ENST00000622571 220 ntBASIC0.74□□□□□ -2.29
HLA-DOBP13765 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HLA-DOBP13765 Y_RNA.49-201ENST00000362714 112 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 Y_RNA.155-201ENST00000363632 101 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 Y_RNA.281-201ENST00000364774 94 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 RNU6-429P-201ENST00000384582 108 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 Y_RNA.549-201ENST00000384657 102 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 RNU6-1018P-201ENST00000516577 106 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 RNU6-531P-201ENST00000516694 104 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 RNU6-448P-201ENST00000517052 107 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 MIR548AI-201ENST00000579940 88 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 MIR376B-201ENST00000614515 100 ntBASIC0.73□□□□□ -2.29
HLA-DOBP13765 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HLA-DOBP13765 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HLA-DOBP13765 RNU6-1313P-201ENST00000362622 102 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 SNORA63.5-201ENST00000363548 123 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 SNORA7.5-201ENST00000410672 110 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
HLA-DOBP13765 Y_RNA.35-201ENST00000362601 101 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 Y_RNA.360-201ENST00000365512 102 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 SNORD38.2-201ENST00000384470 69 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 Y_RNA.629-201ENST00000411368 105 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 AC244098.3-201ENST00000424803 96 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.71□□□□□ -2.3
HLA-DOBP13765 AC068339.1-201ENST00000526965 141 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
HLA-DOBP13765 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.71□□□□□ -2.3
HLA-DOBP13765 MIR101-2-201ENST00000362195 79 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 Y_RNA.291-201ENST00000364886 113 ntBASIC0.7□□□□□ -2.3
HLA-DOBP13765 MIR34C-201ENST00000384831 77 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms