Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
ACTN1P12814 SNORD115-2-201ENST00000362842 82 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 SNORD115-20-201ENST00000365099 82 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 Y_RNA.433-201ENST00000384089 102 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 Y_RNA.697-201ENST00000516776 113 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 AC108081.1-201ENST00000604358 221 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 U6.109-201ENST00000636749 87 ntBASIC0.52□□□□□ -2.33
ACTN1P12814 Y_RNA.32-201ENST00000362589 110 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 RNA5SP133-201ENST00000363368 119 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 RNA5SP62-201ENST00000363457 110 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 AL603914.1-201ENST00000401964 204 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 RNU6-531P-201ENST00000516694 104 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 RNA5SP94-201ENST00000516917 108 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 AC022523.2-201ENST00000561045 150 ntBASIC0.51□□□□□ -2.33
ACTN1P12814 RNU6-915P-201ENST00000364943 103 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 Y_RNA.298-201ENST00000364960 107 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 Y_RNA.398-201ENST00000383952 99 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 MIR513C-201ENST00000401352 84 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 RNU6-394P-201ENST00000410735 107 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 RNU7-197P-201ENST00000458836 62 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 RNU6-469P-201ENST00000516253 101 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 AL359881.1-201ENST00000602916 267 ntBASIC0.5□□□□□ -2.33
ACTN1P12814 RNA5SP517-201ENST00000364724 117 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RNU6-535P-201ENST00000384722 107 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 MIR1270-201ENST00000459320 83 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RNU6-1194P-201ENST00000516208 104 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RNY4P20-201ENST00000516678 93 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 SNORA31.14-201ENST00000516728 116 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RNU7-137P-201ENST00000516788 62 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 MIR3144-201ENST00000579460 79 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 AL137067.1-201ENST00000615933 120 ntBASIC0.49□□□□□ -2.33
ACTN1P12814 RNU6-291P-201ENST00000384720 107 ntBASIC0.48□□□□□ -2.33
ACTN1P12814 PCNPP3-201ENST00000393579 471 ntBASIC0.48□□□□□ -2.33
ACTN1P12814 RNU6-765P-201ENST00000516916 99 ntBASIC0.48□□□□□ -2.33
ACTN1P12814 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
ACTN1P12814 FTX_2.1-201ENST00000618816 94 ntBASIC0.48□□□□□ -2.33
ACTN1P12814 RNU6-886P-201ENST00000384319 105 ntBASIC0.47□□□□□ -2.33
ACTN1P12814 Y_RNA.536-201ENST00000384621 113 ntBASIC0.47□□□□□ -2.33
ACTN1P12814 Y_RNA.580-201ENST00000391004 95 ntBASIC0.47□□□□□ -2.33
ACTN1P12814 RNU4-69P-201ENST00000410677 143 ntBASIC0.47□□□□□ -2.33
ACTN1P12814 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
ACTN1P12814 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ACTN1P12814 RNU6-1104P-201ENST00000384723 104 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ACTN1P12814 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 MTND5P41-201ENST00000517498 206 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 AC138749.4-201ENST00000563970 127 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
ACTN1P12814 RNU4-58P-201ENST00000363192 141 ntBASIC0.45□□□□□ -2.34
ACTN1P12814 Y_RNA.294-201ENST00000364916 102 ntBASIC0.45□□□□□ -2.34
ACTN1P12814 SNORD71-201ENST00000411292 86 ntBASIC0.45□□□□□ -2.34
ACTN1P12814 RNA5SP272-201ENST00000516095 111 ntBASIC0.45□□□□□ -2.34
ACTN1P12814 AC021753.1-201ENST00000635724 168 ntBASIC0.45□□□□□ -2.34
ACTN1P12814 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
ACTN1P12814 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
ACTN1P12814 Y_RNA.119-201ENST00000363301 96 ntBASIC0.44□□□□□ -2.34
ACTN1P12814 Y_RNA.420-201ENST00000384043 110 ntBASIC0.44□□□□□ -2.34
ACTN1P12814 Y_RNA.692-201ENST00000516627 105 ntBASIC0.44□□□□□ -2.34
ACTN1P12814 AP001328.1-201ENST00000528550 176 ntBASIC0.44□□□□□ -2.34
ACTN1P12814 MIR548X2-201ENST00000579776 100 ntBASIC0.44□□□□□ -2.34
ACTN1P12814 MIR101-2-201ENST00000362195 79 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORD114-10-201ENST00000363409 72 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORA63.5-201ENST00000363548 123 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 Y_RNA.299-201ENST00000364973 94 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORD77B-201ENST00000391112 67 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 AC023932.2-201ENST00000603176 175 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 MIR2909-201ENST00000617113 69 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.43□□□□□ -2.34
ACTN1P12814 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 Y_RNA.174-201ENST00000363781 105 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 Y_RNA.215-201ENST00000364204 112 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 Y_RNA.280-201ENST00000364765 112 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 Y_RNA.448-201ENST00000384185 108 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 MIR206-201ENST00000384872 86 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 SUMO1P3-201ENST00000439961 304 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 RNA5SP395-201ENST00000516567 118 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 IGKV1-22-201ENST00000524313 326 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 MIR3121-201ENST00000579680 77 ntBASIC0.42□□□□□ -2.34
ACTN1P12814 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 Y_RNA.114-201ENST00000363265 113 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 RNA5SP245-201ENST00000364239 121 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 RNU6-1229P-201ENST00000364295 107 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 Y_RNA.400-201ENST00000383963 111 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 RNU6-1321P-201ENST00000390905 107 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 RNU6-794P-201ENST00000517261 64 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 AC098479.1-201ENST00000609225 154 ntBASIC0.41□□□□□ -2.34
ACTN1P12814 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
ACTN1P12814 MIR569-201ENST00000385228 96 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms