Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RNU6-168P-201ENST00000516189 101 ntBASIC1.22□□□□□ -2.21
USP1O94782 RNU6-904P-201ENST00000516206 101 ntBASIC1.22□□□□□ -2.21
USP1O94782 AC036111.3-201ENST00000526389 112 ntBASIC1.22□□□□□ -2.21
USP1O94782 MIR376B-201ENST00000614515 100 ntBASIC1.22□□□□□ -2.21
USP1O94782 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
USP1O94782 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-832P-201ENST00000363319 107 ntBASIC1.21□□□□□ -2.22
USP1O94782 SNORD114-10-201ENST00000363409 72 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-32P-201ENST00000383948 107 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-13P-201ENST00000384248 107 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-12P-201ENST00000384604 107 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-41P-201ENST00000384741 107 ntBASIC1.21□□□□□ -2.22
USP1O94782 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
USP1O94782 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
USP1O94782 MIR4694-201ENST00000578534 80 ntBASIC1.21□□□□□ -2.22
USP1O94782 MIR548Z-201ENST00000584743 97 ntBASIC1.21□□□□□ -2.22
USP1O94782 U6.109-201ENST00000636749 87 ntBASIC1.21□□□□□ -2.22
USP1O94782 AL512310.12-203ENST00000640543 90 ntBASIC1.21□□□□□ -2.22
USP1O94782 AC091304.10-201ENST00000641554 121 ntBASIC1.21□□□□□ -2.22
USP1O94782 RNU6-1313P-201ENST00000362622 102 ntBASIC1.2□□□□□ -2.22
USP1O94782 RNY3P2-201ENST00000362918 102 ntBASIC1.2□□□□□ -2.22
USP1O94782 RNU6-1099P-201ENST00000363533 107 ntBASIC1.2□□□□□ -2.22
USP1O94782 RNU6-865P-201ENST00000364772 107 ntBASIC1.2□□□□□ -2.22
USP1O94782 RNU6-580P-201ENST00000365159 107 ntBASIC1.2□□□□□ -2.22
USP1O94782 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
USP1O94782 RNU7-48P-201ENST00000458875 63 ntBASIC1.2□□□□□ -2.22
USP1O94782 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
USP1O94782 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
USP1O94782 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.2□□□□□ -2.22
USP1O94782 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
USP1O94782 MT-TF-201ENST00000387314 71 ntBASIC1.19□□□□□ -2.22
USP1O94782 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
USP1O94782 RNU6-795P-201ENST00000516323 103 ntBASIC1.19□□□□□ -2.22
USP1O94782 RNU6-1006P-201ENST00000516998 103 ntBASIC1.19□□□□□ -2.22
USP1O94782 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
USP1O94782 AC023934.1-201ENST00000574529 2389 ntBASIC1.18□□□□□ -2.22
USP1O94782 RNU6-640P-201ENST00000363693 105 ntBASIC1.18□□□□□ -2.22
USP1O94782 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
USP1O94782 MIR200A-201ENST00000384875 90 ntBASIC1.18□□□□□ -2.22
USP1O94782 DEFB131E-201ENST00000532329 154 ntBASIC1.18□□□□□ -2.22
USP1O94782 AC138749.4-201ENST00000563970 127 ntBASIC1.18□□□□□ -2.22
USP1O94782 AC133485.1-201ENST00000567176 124 ntBASIC1.18□□□□□ -2.22
USP1O94782 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
USP1O94782 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
USP1O94782 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.18□□□□□ -2.22
USP1O94782 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
USP1O94782 RNA5SP133-201ENST00000363368 119 ntBASIC1.17□□□□□ -2.22
USP1O94782 Y_RNA.348-201ENST00000365403 103 ntBASIC1.17□□□□□ -2.22
USP1O94782 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
USP1O94782 Y_RNA.659-201ENST00000515994 113 ntBASIC1.17□□□□□ -2.22
USP1O94782 Y_RNA.677-201ENST00000516401 85 ntBASIC1.17□□□□□ -2.22
USP1O94782 AC090897.1-201ENST00000580909 226 ntBASIC1.17□□□□□ -2.22
USP1O94782 AL442128.1-201ENST00000615151 90 ntBASIC1.17□□□□□ -2.22
USP1O94782 AC012531.4-201ENST00000616509 177 ntBASIC1.17□□□□□ -2.22
USP1O94782 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
USP1O94782 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
USP1O94782 Y_RNA.78-201ENST00000362970 110 ntBASIC1.16□□□□□ -2.22
USP1O94782 RNU4-36P-201ENST00000364294 144 ntBASIC1.16□□□□□ -2.22
USP1O94782 Y_RNA.377-201ENST00000365644 108 ntBASIC1.16□□□□□ -2.22
USP1O94782 RNU6-905P-201ENST00000384434 107 ntBASIC1.16□□□□□ -2.22
USP1O94782 SNORA72.6-201ENST00000384520 129 ntBASIC1.16□□□□□ -2.22
USP1O94782 Y_RNA.588-201ENST00000391254 102 ntBASIC1.16□□□□□ -2.22
USP1O94782 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.16□□□□□ -2.22
USP1O94782 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
USP1O94782 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
USP1O94782 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
USP1O94782 SNORA25.16-201ENST00000516741 121 ntBASIC1.16□□□□□ -2.22
USP1O94782 AP001362.1-201ENST00000625165 124 ntBASIC1.16□□□□□ -2.22
USP1O94782 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USP1O94782 RNU6-1298P-201ENST00000362456 101 ntBASIC1.15□□□□□ -2.23
USP1O94782 RNU1-36P-201ENST00000365130 165 ntBASIC1.15□□□□□ -2.23
USP1O94782 RNU6-994P-201ENST00000410507 111 ntBASIC1.15□□□□□ -2.23
USP1O94782 RNU7-185P-201ENST00000459215 60 ntBASIC1.15□□□□□ -2.23
USP1O94782 RNU6-1018P-201ENST00000516577 106 ntBASIC1.15□□□□□ -2.23
USP1O94782 AC020891.4-201ENST00000605745 93 ntBASIC1.15□□□□□ -2.23
USP1O94782 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
USP1O94782 AP001318.4-201ENST00000616637 121 ntBASIC1.15□□□□□ -2.23
USP1O94782 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
USP1O94782 RNU6-403P-201ENST00000363163 104 ntBASIC1.14□□□□□ -2.23
USP1O94782 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
USP1O94782 RNU6-1113P-201ENST00000384348 107 ntBASIC1.14□□□□□ -2.23
USP1O94782 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.14□□□□□ -2.23
USP1O94782 MIR18B-201ENST00000454574 71 ntBASIC1.14□□□□□ -2.23
USP1O94782 SCARNA23-201ENST00000516060 130 ntBASIC1.14□□□□□ -2.23
USP1O94782 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
USP1O94782 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
USP1O94782 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.14□□□□□ -2.23
USP1O94782 RNU6-170P-201ENST00000362832 104 ntBASIC1.13□□□□□ -2.23
USP1O94782 Y_RNA.107-201ENST00000363190 121 ntBASIC1.13□□□□□ -2.23
USP1O94782 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
USP1O94782 RNU6-934P-201ENST00000365154 107 ntBASIC1.13□□□□□ -2.23
USP1O94782 Y_RNA.467-201ENST00000384297 102 ntBASIC1.13□□□□□ -2.23
USP1O94782 Y_RNA.544-201ENST00000384650 113 ntBASIC1.13□□□□□ -2.23
USP1O94782 RNU6-531P-201ENST00000516694 104 ntBASIC1.13□□□□□ -2.23
USP1O94782 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
USP1O94782 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.13□□□□□ -2.23
USP1O94782 Y_RNA.818-201ENST00000618813 71 ntBASIC1.13□□□□□ -2.23
USP1O94782 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
USP1O94782 Y_RNA.98-201ENST00000363109 102 ntBASIC1.12□□□□□ -2.23
USP1O94782 SNORD38.1-201ENST00000363863 68 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms