Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 U2.14-201ENST00000615943 113 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
UPK1BO75841 RNU4-84P-201ENST00000364200 139 ntBASIC-0.71□□□□□ -2.52
UPK1BO75841 RNU6-690P-201ENST00000365242 106 ntBASIC-0.71□□□□□ -2.52
UPK1BO75841 MIR4744-201ENST00000581563 82 ntBASIC-0.71□□□□□ -2.52
UPK1BO75841 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 RNU1-141P-201ENST00000364623 158 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 RNA5SP451-201ENST00000410588 110 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 RNU7-48P-201ENST00000458875 63 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 MIR4282-201ENST00000583613 67 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 AC096720.1-201ENST00000604441 183 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
UPK1BO75841 MIR101-1-201ENST00000362265 75 ntBASIC-0.73□□□□□ -2.53
UPK1BO75841 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.73□□□□□ -2.53
UPK1BO75841 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.73□□□□□ -2.53
UPK1BO75841 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
UPK1BO75841 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.73□□□□□ -2.53
UPK1BO75841 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 SNORA25.7-201ENST00000364375 127 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 RNU6-524P-201ENST00000384270 107 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MIR206-201ENST00000384872 86 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 RNU6-578P-201ENST00000390980 103 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 SNORD63B-201ENST00000411005 70 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 RNU7-74P-201ENST00000459104 62 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MTND5P40-201ENST00000559945 246 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MIR4432-201ENST00000581823 84 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MIR7111-201ENST00000619751 72 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MTND4P29-201ENST00000503122 1372 ntBASIC-0.74□□□□□ -2.53
UPK1BO75841 MIR181B2-201ENST00000385004 89 ntBASIC-0.75□□□□□ -2.53
UPK1BO75841 RNY3P16-201ENST00000516338 101 ntBASIC-0.75□□□□□ -2.53
UPK1BO75841 MIR4680-201ENST00000580906 66 ntBASIC-0.75□□□□□ -2.53
UPK1BO75841 uc_338.10-201ENST00000621872 182 ntBASIC-0.75□□□□□ -2.53
UPK1BO75841 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 MT-TD-201ENST00000387419 68 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 MIR548I2-201ENST00000408348 149 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNU6-240P-201ENST00000516098 97 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNA5SP236-201ENST00000516169 116 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 YWHAEP2-201ENST00000580066 112 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 MIR4493-201ENST00000584016 73 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 RNU2-4P-201ENST00000606190 192 ntBASIC-0.76□□□□□ -2.53
UPK1BO75841 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.76□□□□□ -2.53
UPK1BO75841 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.76□□□□□ -2.53
UPK1BO75841 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 RNU6-643P-201ENST00000384018 107 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 MIR519A1-201ENST00000385257 85 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
UPK1BO75841 RNU6-735P-201ENST00000410612 107 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 RNU4-69P-201ENST00000410677 143 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 MIR548AG2-201ENST00000581228 64 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 MIR548S-201ENST00000581352 82 ntBASIC-0.77□□□□□ -2.53
UPK1BO75841 RNU6-170P-201ENST00000362832 104 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 RNA5SP98-201ENST00000363158 137 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 MIR1912-201ENST00000410389 80 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 RNU7-106P-201ENST00000459514 67 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 MIR4643-201ENST00000577473 78 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 MIR4802-201ENST00000581881 80 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 AC009779.6-201ENST00000603972 165 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 AC069503.3-201ENST00000618674 145 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 AP001362.1-201ENST00000625165 124 ntBASIC-0.78□□□□□ -2.53
UPK1BO75841 MIR519E-201ENST00000385075 84 ntBASIC-0.79□□□□□ -2.54
UPK1BO75841 RNU7-164P-201ENST00000459221 62 ntBASIC-0.79□□□□□ -2.54
UPK1BO75841 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.79□□□□□ -2.54
UPK1BO75841 AC021443.1-201ENST00000604478 211 ntBASIC-0.79□□□□□ -2.54
UPK1BO75841 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 AL603914.1-201ENST00000401964 204 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 AC138907.4-201ENST00000570107 226 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 MIR5589-201ENST00000579442 60 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 MIR548AE1-201ENST00000583292 70 ntBASIC-0.8□□□□□ -2.54
UPK1BO75841 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.81□□□□□ -2.54
UPK1BO75841 RNU6-493P-201ENST00000391321 108 ntBASIC-0.81□□□□□ -2.54
UPK1BO75841 AC093423.1-201ENST00000440817 142 ntBASIC-0.81□□□□□ -2.54
UPK1BO75841 RNU7-123P-201ENST00000515911 60 ntBASIC-0.81□□□□□ -2.54
UPK1BO75841 RNU6-175P-201ENST00000516896 107 ntBASIC-0.81□□□□□ -2.54
UPK1BO75841 MIR335-201ENST00000362173 94 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 SNORD114-29-201ENST00000364819 70 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 RNY3P14-201ENST00000384309 102 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.82□□□□□ -2.54
UPK1BO75841 RNU6-455P-201ENST00000384681 107 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms