Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU2-35P-201ENST00000516446 142 ntBASIC-0.85□□□□□ -2.55
LSM1O15116 MIR4802-201ENST00000581881 80 ntBASIC-0.85□□□□□ -2.55
LSM1O15116 MIR4493-201ENST00000584016 73 ntBASIC-0.85□□□□□ -2.55
LSM1O15116 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 SNORD114-11-201ENST00000363738 75 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 RNU6-474P-201ENST00000384243 107 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 AC113618.1-201ENST00000416747 285 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 AC093423.1-201ENST00000440817 142 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 MTND5P20-201ENST00000448677 143 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 MIR4744-201ENST00000581563 82 ntBASIC-0.86□□□□□ -2.55
LSM1O15116 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 SNORD75.1-201ENST00000408373 60 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 AL121914.1-201ENST00000450188 156 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 RNU7-13P-201ENST00000516413 62 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 MIR4500-201ENST00000579472 76 ntBASIC-0.87□□□□□ -2.55
LSM1O15116 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.87□□□□□ -2.55
LSM1O15116 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 RNU7-188P-201ENST00000517063 64 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 RNU6-988P-201ENST00000519081 107 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.88□□□□□ -2.55
LSM1O15116 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 MIR206-201ENST00000384872 86 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 MIR181B2-201ENST00000385004 89 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 RNU7-48P-201ENST00000458875 63 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 MIR548AG2-201ENST00000581228 64 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 MIR4432-201ENST00000581823 84 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 AC069503.3-201ENST00000618674 145 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 AL391099.1-201ENST00000624635 187 ntBASIC-0.89□□□□□ -2.55
LSM1O15116 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 RNU6-578P-201ENST00000390980 103 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 SNORD63B-201ENST00000411005 70 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 RNU7-195P-201ENST00000458793 62 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.9□□□□□ -2.55
LSM1O15116 MIR335-201ENST00000362173 94 ntBASIC-0.91□□□□□ -2.56
LSM1O15116 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.91□□□□□ -2.56
LSM1O15116 MT-TD-201ENST00000387419 68 ntBASIC-0.91□□□□□ -2.56
LSM1O15116 MIR4636-201ENST00000582271 80 ntBASIC-0.91□□□□□ -2.56
LSM1O15116 RNU6-170P-201ENST00000362832 104 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 RNU4-84P-201ENST00000364200 139 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 SNORA25.7-201ENST00000364375 127 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 RNU6-643P-201ENST00000384018 107 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 MIR519E-201ENST00000385075 84 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 RNU6-175P-201ENST00000516896 107 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 MIR4680-201ENST00000580906 66 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 MIR4473-201ENST00000583731 91 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 AC011603.4-201ENST00000611325 277 ntBASIC-0.92□□□□□ -2.56
LSM1O15116 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 RNU6-690P-201ENST00000365242 106 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 MIR604-201ENST00000384880 94 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 RNU4-69P-201ENST00000410677 143 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 AC096720.1-201ENST00000604441 183 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 uc_338.10-201ENST00000621872 182 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 AP001362.1-201ENST00000625165 124 ntBASIC-0.93□□□□□ -2.56
LSM1O15116 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.93□□□□□ -2.56
LSM1O15116 MTND4P29-201ENST00000503122 1372 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 RNU6-524P-201ENST00000384270 107 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 MIR617-201ENST00000385030 97 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
LSM1O15116 AC114755.3-201ENST00000481111 251 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.94□□□□□ -2.56
LSM1O15116 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 RNU6-735P-201ENST00000410612 107 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 Z95118.1-201ENST00000421372 247 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.95□□□□□ -2.56
LSM1O15116 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.95□□□□□ -2.56
LSM1O15116 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
LSM1O15116 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 MIR539-201ENST00000365690 78 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 RNU7-106P-201ENST00000459514 67 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
LSM1O15116 MIR4643-201ENST00000577473 78 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 YWHAEP2-201ENST00000580066 112 ntBASIC-0.96□□□□□ -2.56
LSM1O15116 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 SNORD114-29-201ENST00000364819 70 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNU6-571P-201ENST00000384128 107 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNU6-472P-201ENST00000384299 107 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNU6-480P-201ENST00000384332 107 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNA5SP66-201ENST00000517178 101 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 MIR548AE1-201ENST00000583292 70 ntBASIC-0.97□□□□□ -2.56
LSM1O15116 RNU2-4P-201ENST00000606190 192 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms