Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 RNU6-662P-201ENST00000384253 104 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 RNU6-901P-201ENST00000384593 106 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 MIR206-201ENST00000384872 86 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 MIR519E-201ENST00000385075 84 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.03□□□□□ -2.57
CHD2O14647 SNORA13-201ENST00000458790 133 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 MIR4473-201ENST00000583731 91 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 AC009779.6-201ENST00000603972 165 ntBASIC-1.03□□□□□ -2.57
CHD2O14647 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 RNU6-121P-201ENST00000410525 99 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 RNA5SP144-201ENST00000410846 116 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.04□□□□□ -2.58
CHD2O14647 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
CHD2O14647 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RNU6-211P-201ENST00000384047 107 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RNU6-102P-201ENST00000384485 104 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RNU4-43P-201ENST00000410628 137 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 AC098614.3-201ENST00000438957 440 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 AC021146.6-201ENST00000514659 117 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RNU7-137P-201ENST00000516788 62 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RNU6-570P-201ENST00000517051 105 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 MIR1302-11-201ENST00000408051 138 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 MIR1302-9-201ENST00000408365 138 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 MIR1302-10-201ENST00000408734 138 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
CHD2O14647 MIR1302-2-201ENST00000607096 138 ntBASIC-1.05□□□□□ -2.58
CHD2O14647 MIR519A1-201ENST00000385257 85 ntBASIC-1.06□□□□□ -2.58
CHD2O14647 MT-TY-201ENST00000387409 66 ntBASIC-1.06□□□□□ -2.58
CHD2O14647 MIR216B-201ENST00000390186 82 ntBASIC-1.06□□□□□ -2.58
CHD2O14647 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.07□□□□□ -2.58
CHD2O14647 RNU6-24P-201ENST00000384440 107 ntBASIC-1.07□□□□□ -2.58
CHD2O14647 MIR4324-201ENST00000584846 72 ntBASIC-1.07□□□□□ -2.58
CHD2O14647 MIR376A2-201ENST00000636782 80 ntBASIC-1.07□□□□□ -2.58
CHD2O14647 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 SNORD63B-201ENST00000411005 70 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 RN7SKP19-201ENST00000516016 252 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 RNU6-976P-201ENST00000516086 111 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 RNA5SP461-201ENST00000516451 104 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 SNORD115-35-201ENST00000365122 82 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 RNU6-47P-201ENST00000383866 107 ntBASIC-1.08□□□□□ -2.58
CHD2O14647 SNORA25.1-201ENST00000362326 128 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 SNORD116-4-201ENST00000384733 96 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 MIR9-2-201ENST00000384838 87 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 RNU7-195P-201ENST00000458793 62 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 MIR1270-201ENST00000459320 83 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHD2O14647 MIR4744-201ENST00000581563 82 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 AL359881.1-201ENST00000602916 267 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 AC112487.2-201ENST00000637950 304 ntBASIC-1.09□□□□□ -2.58
CHD2O14647 RNU6-900P-201ENST00000384498 102 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 RNU6-561P-201ENST00000516222 102 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 RNU6-103P-201ENST00000363686 107 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 MIR539-201ENST00000365690 78 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
CHD2O14647 RNU6-823P-201ENST00000391042 103 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 AC138393.2-201ENST00000414742 246 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 MIR378F-201ENST00000578143 78 ntBASIC-1.1□□□□□ -2.59
CHD2O14647 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CHD2O14647 RNU6-770P-201ENST00000363929 105 ntBASIC-1.11□□□□□ -2.59
CHD2O14647 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.11□□□□□ -2.59
CHD2O14647 AP000676.1-201ENST00000533307 52 ntBASIC-1.11□□□□□ -2.59
CHD2O14647 RNU6-154P-201ENST00000384306 106 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 SNORD2.1-201ENST00000458762 69 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 RNU6-881P-201ENST00000516813 102 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 AC021443.1-201ENST00000604478 211 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 RNU4-17P-201ENST00000365598 141 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 AC016907.1-201ENST00000419483 435 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 RNA5SP236-201ENST00000516169 116 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.12□□□□□ -2.59
CHD2O14647 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 SNORD56B-201ENST00000384713 71 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 MIR6851-201ENST00000617060 67 ntBASIC-1.13□□□□□ -2.59
CHD2O14647 SNORD114-3-201ENST00000364969 75 ntBASIC-1.14□□□□□ -2.59
CHD2O14647 RNU6-690P-201ENST00000365242 106 ntBASIC-1.14□□□□□ -2.59
CHD2O14647 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms