Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 AC138907.4-201ENST00000570107 226 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 AC021443.1-201ENST00000604478 211 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 AC072026.1-201ENST00000605023 201 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.23□□□□□ -2.37
NKX2-6A6NCS4 RNU6-682P-201ENST00000363843 106 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 RNU7-164P-201ENST00000459221 62 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 RNU7-123P-201ENST00000515911 60 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 RNA5SP476-201ENST00000516613 103 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 RNU7-137P-201ENST00000516788 62 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 AC138749.4-201ENST00000563970 127 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 MIR6718-201ENST00000616153 80 ntBASIC0.22□□□□□ -2.37
NKX2-6A6NCS4 SNORD115-2-201ENST00000362842 82 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 SNORD115-20-201ENST00000365099 82 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 RNU7-121P-201ENST00000516604 62 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 RNA5SP268-201ENST00000516828 124 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 RNU6-765P-201ENST00000516916 99 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 AC108081.1-201ENST00000604358 221 ntBASIC0.21□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.240-201ENST00000364469 95 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 RNU6-200P-201ENST00000364743 107 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.401-201ENST00000383965 117 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 RNU6-35P-201ENST00000384530 107 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.584-201ENST00000391090 114 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 RNA5SP285-201ENST00000516619 119 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 DNAJC19P2-201ENST00000593340 302 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 MIR7107-201ENST00000611489 80 ntBASIC0.2□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 RNU4-11P-201ENST00000365287 132 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 MTATP6P21-201ENST00000440681 189 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 RNA5SP227-201ENST00000516184 113 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 MIR3646-201ENST00000578301 84 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 AC244669.1-204ENST00000621564 178 ntBASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNU4-58P-201ENST00000363192 141 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNY1P2-201ENST00000364820 117 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1130P-201ENST00000365434 107 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 SNORD18B-201ENST00000365659 72 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 SNORD28-201ENST00000384706 75 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNU6-460P-201ENST00000391158 108 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1135P-201ENST00000411083 103 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 RNA5SP47-201ENST00000517230 109 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 AC011603.4-201ENST00000611325 277 ntBASIC0.18□□□□□ -2.38
NKX2-6A6NCS4 MIR101-2-201ENST00000362195 79 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNU6-151P-201ENST00000364158 107 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNA5SP299-201ENST00000391203 116 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 AL603914.1-201ENST00000401964 204 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNU7-120P-201ENST00000459334 63 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 AC112693.2-201ENST00000556538 232 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 MIR4752-201ENST00000579672 72 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 AC004792.1-201ENST00000614523 137 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 AC067863.3-201ENST00000624172 122 ntBASIC0.17□□□□□ -2.38
NKX2-6A6NCS4 SNORD114-10-201ENST00000363409 72 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 RNU6-1318P-201ENST00000365389 103 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 RNU4-69P-201ENST00000410677 143 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 AC108059.2-201ENST00000434626 151 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 HAR1A.1-201ENST00000459583 118 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 RNY4P20-201ENST00000516678 93 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 SNORA81.3-201ENST00000517283 198 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 MIR6755-201ENST00000619993 66 ntBASIC0.16□□□□□ -2.38
NKX2-6A6NCS4 Y_RNA.8-201ENST00000362353 102 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.29-201ENST00000362570 113 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.441-201ENST00000384123 112 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 MIR206-201ENST00000384872 86 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 MIR329-2-201ENST00000385029 84 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 MIR4500-201ENST00000579472 76 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.15□□□□□ -2.39
NKX2-6A6NCS4 MIR6828-201ENST00000636181 60 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms