Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AL450471.1-201ENST00000447509 127 ntBASIC1.88□□□□□ -2.11
U3KQE9 RNA5SP320-201ENST00000516263 124 ntBASIC1.88□□□□□ -2.11
U3KQE9 MIR7106-201ENST00000612419 65 ntBASIC1.88□□□□□ -2.11
U3KQE9 MIR6516-201ENST00000630554 81 ntBASIC1.88□□□□□ -2.11
U3KQE9 MIR1297-201ENST00000637311 77 ntBASIC1.88□□□□□ -2.11
U3KQE9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
U3KQE9 ZNF658B-202ENST00000615961 3375 ntBASIC1.88□□□□□ -2.11
U3KQE9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
U3KQE9 SNORA25.3-201ENST00000363205 127 ntBASIC1.87□□□□□ -2.11
U3KQE9 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
U3KQE9 SNORA11.1-201ENST00000408133 129 ntBASIC1.87□□□□□ -2.11
U3KQE9 RNA5SP181-201ENST00000410246 98 ntBASIC1.87□□□□□ -2.11
U3KQE9 RNA5SP184-201ENST00000411071 108 ntBASIC1.87□□□□□ -2.11
U3KQE9 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
U3KQE9 RNA5SP356-201ENST00000515972 94 ntBASIC1.87□□□□□ -2.11
U3KQE9 RNA5SP82-201ENST00000516707 92 ntBASIC1.87□□□□□ -2.11
U3KQE9 MIR4319-201ENST00000577285 85 ntBASIC1.87□□□□□ -2.11
U3KQE9 AC104996.3-201ENST00000590718 94 ntBASIC1.87□□□□□ -2.11
U3KQE9 MIR6895-201ENST00000613497 78 ntBASIC1.87□□□□□ -2.11
U3KQE9 AC006386.2-201ENST00000624491 75 ntBASIC1.87□□□□□ -2.11
U3KQE9 AC012005.1-201ENST00000624575 75 ntBASIC1.87□□□□□ -2.11
U3KQE9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
U3KQE9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
U3KQE9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
U3KQE9 MIR516A2-201ENST00000384888 90 ntBASIC1.86□□□□□ -2.11
U3KQE9 MIR516A1-201ENST00000385033 90 ntBASIC1.86□□□□□ -2.11
U3KQE9 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
U3KQE9 MIR1185-1-201ENST00000408598 86 ntBASIC1.86□□□□□ -2.11
U3KQE9 RPL23AP83-201ENST00000434984 473 ntBASIC1.86□□□□□ -2.11
U3KQE9 AC108938.1-201ENST00000451204 136 ntBASIC1.86□□□□□ -2.11
U3KQE9 RNU6-807P-201ENST00000516805 107 ntBASIC1.86□□□□□ -2.11
U3KQE9 SNORA44.1-201ENST00000517031 108 ntBASIC1.86□□□□□ -2.11
U3KQE9 MIR4491-201ENST00000581087 68 ntBASIC1.86□□□□□ -2.11
U3KQE9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.86□□□□□ -2.11
U3KQE9 MIR21-201ENST00000362134 72 ntBASIC1.85□□□□□ -2.11
U3KQE9 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
U3KQE9 RNA5SP68-201ENST00000363885 119 ntBASIC1.85□□□□□ -2.11
U3KQE9 MIR483-201ENST00000385070 76 ntBASIC1.85□□□□□ -2.11
U3KQE9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.85□□□□□ -2.11
U3KQE9 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
U3KQE9 SNORA59A-201ENST00000459326 152 ntBASIC1.85□□□□□ -2.11
U3KQE9 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
U3KQE9 RNU6-75P-201ENST00000515944 104 ntBASIC1.85□□□□□ -2.11
U3KQE9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.85□□□□□ -2.11
U3KQE9 MIR548H5-201ENST00000580314 60 ntBASIC1.85□□□□□ -2.11
U3KQE9 MIR3064-201ENST00000581130 66 ntBASIC1.85□□□□□ -2.11
U3KQE9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
U3KQE9 RNU1-36P-201ENST00000365130 165 ntBASIC1.84□□□□□ -2.11
U3KQE9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.84□□□□□ -2.11
U3KQE9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.84□□□□□ -2.11
U3KQE9 SNORD93-201ENST00000408813 74 ntBASIC1.84□□□□□ -2.11
U3KQE9 SNORD63B-201ENST00000411005 70 ntBASIC1.84□□□□□ -2.11
U3KQE9 SNORA18.5-201ENST00000516616 101 ntBASIC1.84□□□□□ -2.11
U3KQE9 MIR6817-201ENST00000615588 66 ntBASIC1.84□□□□□ -2.11
U3KQE9 MIR1291-201ENST00000627649 87 ntBASIC1.84□□□□□ -2.11
U3KQE9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
U3KQE9 RNU6-590P-201ENST00000365039 107 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.83□□□□□ -2.12
U3KQE9 MIR196B-201ENST00000384852 84 ntBASIC1.83□□□□□ -2.12
U3KQE9 SNORD77.2-201ENST00000391045 68 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU6-947P-201ENST00000516264 106 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU6-531P-201ENST00000516694 104 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU6-765P-201ENST00000516916 99 ntBASIC1.83□□□□□ -2.12
U3KQE9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.83□□□□□ -2.12
U3KQE9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
U3KQE9 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
U3KQE9 RNU6-411P-201ENST00000384451 107 ntBASIC1.82□□□□□ -2.12
U3KQE9 MIR635-201ENST00000384830 98 ntBASIC1.82□□□□□ -2.12
U3KQE9 snoU13.9-201ENST00000458927 103 ntBASIC1.82□□□□□ -2.12
U3KQE9 AC114801.3-201ENST00000510231 177 ntBASIC1.82□□□□□ -2.12
U3KQE9 AC026436.1-201ENST00000510537 270 ntBASIC1.82□□□□□ -2.12
U3KQE9 RNU6-871P-201ENST00000516122 100 ntBASIC1.82□□□□□ -2.12
U3KQE9 RNA5SP148-201ENST00000516527 94 ntBASIC1.82□□□□□ -2.12
U3KQE9 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
U3KQE9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
U3KQE9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
U3KQE9 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
U3KQE9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.81□□□□□ -2.12
U3KQE9 SNORD114-30-201ENST00000364448 72 ntBASIC1.81□□□□□ -2.12
U3KQE9 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
U3KQE9 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
U3KQE9 RNA5SP292-201ENST00000390974 118 ntBASIC1.81□□□□□ -2.12
U3KQE9 SNORD100-201ENST00000408573 76 ntBASIC1.81□□□□□ -2.12
U3KQE9 SNORA31.11-201ENST00000516528 139 ntBASIC1.81□□□□□ -2.12
U3KQE9 RNA5SP402-201ENST00000517148 110 ntBASIC1.81□□□□□ -2.12
U3KQE9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
U3KQE9 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
U3KQE9 MIR520H-201ENST00000385126 88 ntBASIC1.8□□□□□ -2.12
U3KQE9 SNORA25.16-201ENST00000516741 121 ntBASIC1.8□□□□□ -2.12
U3KQE9 MIR5007-201ENST00000583098 95 ntBASIC1.8□□□□□ -2.12
U3KQE9 AL137847.3-201ENST00000611521 109 ntBASIC1.8□□□□□ -2.12
U3KQE9 uc_338.6-201ENST00000613544 171 ntBASIC1.8□□□□□ -2.12
U3KQE9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.79□□□□□ -2.12
U3KQE9 RNU6-161P-201ENST00000363051 106 ntBASIC1.79□□□□□ -2.12
U3KQE9 SNORA5B-201ENST00000363786 132 ntBASIC1.79□□□□□ -2.12
U3KQE9 MIR1257-201ENST00000408490 117 ntBASIC1.79□□□□□ -2.12
U3KQE9 Z98742.3-201ENST00000418637 326 ntBASIC1.79□□□□□ -2.12
U3KQE9 RNU7-106P-201ENST00000459514 67 ntBASIC1.79□□□□□ -2.12
U3KQE9 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms