Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 COX6CP6-201ENST00000490840 228 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 MTND5P41-201ENST00000517498 206 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-508P-201ENST00000363231 103 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-647P-201ENST00000364243 107 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR569-201ENST00000385228 96 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD77B-201ENST00000391112 67 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU4-69P-201ENST00000410677 143 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-448P-201ENST00000517052 107 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 AC008608.1-201ENST00000603910 127 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 U7.2-201ENST00000607576 63 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD100-201ENST00000408573 76 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR6082-201ENST00000613604 109 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR8066-201ENST00000617280 78 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 AL589743.1-201ENST00000551932 2712 ntBASIC0.9□□□□□ -2.26
COL4A3BPQ9Y5P4 HSBP1P2-201ENST00000299671 229 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.343-201ENST00000365354 112 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORA72.6-201ENST00000384520 129 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU7-200P-201ENST00000516105 62 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNY4P20-201ENST00000516678 93 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR4491-201ENST00000581087 68 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNA5SP117-201ENST00000365294 118 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-209P-201ENST00000384118 107 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-42P-201ENST00000384165 107 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-907P-201ENST00000390924 102 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 AC108081.1-201ENST00000604358 221 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORD114-10-201ENST00000363409 72 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 snoU13.18-201ENST00000459483 104 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 AC002350.1-201ENST00000490759 375 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 RNY1P5-201ENST00000383890 115 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AC133485.1-201ENST00000567176 124 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR140-201ENST00000385282 100 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU7-137P-201ENST00000516788 62 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AC022709.1-201ENST00000615967 87 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AC096949.1-201ENST00000412047 152 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-426P-201ENST00000516464 97 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORD67.1-201ENST00000516618 108 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU4-58P-201ENST00000363192 141 ntBASIC0.84□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR759-201ENST00000390224 91 ntBASIC0.84□□□□□ -2.27
COL4A3BPQ9Y5P4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR548I1-201ENST00000408810 149 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP136-201ENST00000410906 107 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RN7SKP19-201ENST00000516016 252 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-469P-201ENST00000516253 101 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-255P-201ENST00000516957 105 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP121-201ENST00000516537 101 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR5000-201ENST00000577717 103 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP133-201ENST00000363368 119 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR489-201ENST00000384923 84 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 AL158147.1-201ENST00000443970 75 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 SNORA25.16-201ENST00000516741 121 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 AC022523.2-201ENST00000561045 150 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 U6.109-201ENST00000636749 87 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 SNORA40-201ENST00000388090 126 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-135P-201ENST00000516769 101 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR3163-201ENST00000581592 73 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR7111-201ENST00000619751 72 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 AC138907.6-201ENST00000568401 126 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 AL359881.1-201ENST00000602916 267 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms