Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL133373.1-201ENST00000497098 94 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 RNU11-2P-201ENST00000516898 142 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 MIR4713-201ENST00000582691 75 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 MIR8074-201ENST00000615081 81 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 RNU7-85P-201ENST00000458851 63 ntBASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 RNU6-947P-201ENST00000516264 106 ntBASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 RNU7-153P-201ENST00000516455 62 ntBASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 MIR6516-201ENST00000630554 81 ntBASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB11Q9Y5F2 RNA5SP289-201ENST00000362332 137 ntBASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 RNU4-32P-201ENST00000363404 141 ntBASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 SNORA25.13-201ENST00000516395 103 ntBASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 uc_338.6-201ENST00000613544 171 ntBASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHB11Q9Y5F2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB11Q9Y5F2 MIR1185-1-201ENST00000408598 86 ntBASIC2.36□□□□□ -2.03
PCDHB11Q9Y5F2 AC245517.4-201ENST00000448601 281 ntBASIC2.36□□□□□ -2.03
PCDHB11Q9Y5F2 MIR4769-201ENST00000584126 77 ntBASIC2.36□□□□□ -2.03
PCDHB11Q9Y5F2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
PCDHB11Q9Y5F2 RNU6-315P-201ENST00000362666 107 ntBASIC2.35□□□□□ -2.03
PCDHB11Q9Y5F2 SNORD114-30-201ENST00000364448 72 ntBASIC2.35□□□□□ -2.03
PCDHB11Q9Y5F2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.35□□□□□ -2.03
PCDHB11Q9Y5F2 RNU6-65P-201ENST00000516332 98 ntBASIC2.35□□□□□ -2.03
PCDHB11Q9Y5F2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 MIR103A2-201ENST00000362154 78 ntBASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 SNORA72.6-201ENST00000384520 129 ntBASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 RNU6-129P-201ENST00000391022 107 ntBASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 MIR4287-201ENST00000579398 78 ntBASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 MIR6873-201ENST00000622788 63 ntBASIC2.34□□□□□ -2.03
PCDHB11Q9Y5F2 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
PCDHB11Q9Y5F2 RNA5SP264-201ENST00000363115 107 ntBASIC2.33□□□□□ -2.04
PCDHB11Q9Y5F2 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
PCDHB11Q9Y5F2 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
PCDHB11Q9Y5F2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHB11Q9Y5F2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-654P-201ENST00000364373 107 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-580P-201ENST00000365159 107 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 AC073261.1-201ENST00000429409 121 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 AC005908.1-201ENST00000468701 347 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 MIR8063-201ENST00000621930 81 ntBASIC2.32□□□□□ -2.04
PCDHB11Q9Y5F2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 MIR302D-201ENST00000362275 68 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 SNORD36A-201ENST00000362874 73 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-624P-201ENST00000363411 107 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 snoU13.11-201ENST00000459219 104 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 MIR4299-201ENST00000577899 72 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 MIR4491-201ENST00000581087 68 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 SNRPGP19-201ENST00000603826 189 ntBASIC2.31□□□□□ -2.04
PCDHB11Q9Y5F2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 RNU4-58P-201ENST00000363192 141 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-53P-201ENST00000365367 106 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 MIR516A2-201ENST00000384888 90 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 MIR516A1-201ENST00000385033 90 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 MIR889-201ENST00000401280 79 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 MIR18B-201ENST00000454574 71 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 AC023790.1-201ENST00000482174 347 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-478P-201ENST00000363904 110 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-243P-201ENST00000391140 107 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 Y_RNA.588-201ENST00000391254 102 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 RNA5SP95-201ENST00000410319 137 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 AC108210.2-201ENST00000503681 201 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-531P-201ENST00000516694 104 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 MIR4796-201ENST00000580742 81 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 AC145423.2-201ENST00000610631 239 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
PCDHB11Q9Y5F2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 SNORD93-201ENST00000408813 74 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 SNORA25.16-201ENST00000516741 121 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 AC103810.8-201ENST00000607347 118 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PCDHB11Q9Y5F2 RNU6-1229P-201ENST00000364295 107 ntBASIC2.27□□□□□ -2.05
PCDHB11Q9Y5F2 RNU6-811P-201ENST00000384069 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms