Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.567-201ENST00000384736 106 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 RNA5SP237-201ENST00000410414 113 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 AP002392.1-201ENST00000537692 208 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
SHANK1Q9Y566 RNU6-690P-201ENST00000365242 106 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-913P-201ENST00000390913 95 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC006461.1-201ENST00000412637 326 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 ACA64.5-201ENST00000516207 127 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNA5SP67-201ENST00000516422 131 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-1271P-201ENST00000517049 105 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU7-35P-201ENST00000517174 62 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 MIR30D-201ENST00000362283 70 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORD114-10-201ENST00000363409 72 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-726P-201ENST00000364680 107 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU6-768P-201ENST00000384683 107 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AL078595.1-201ENST00000404458 226 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC096949.1-201ENST00000412047 152 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.662-201ENST00000516028 97 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 RNU7-121P-201ENST00000516604 62 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 AC112693.2-201ENST00000556538 232 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
SHANK1Q9Y566 SNORD18A-201ENST00000363753 72 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNORA1-201ENST00000384107 130 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-1149P-201ENST00000516810 97 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR4308-201ENST00000580634 81 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AL365265.1-201ENST00000621045 234 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.174-201ENST00000363781 105 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-196P-201ENST00000384315 107 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.552-201ENST00000384665 112 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-1321P-201ENST00000390905 107 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNA5SP144-201ENST00000410846 116 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 SNX3P1X-201ENST00000414887 175 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AC073261.1-201ENST00000429409 121 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.644-201ENST00000459006 113 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.674-201ENST00000516362 113 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 RNU6-111P-201ENST00000517179 105 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 AC021613.1-201ENST00000623880 111 ntBASIC0.25□□□□□ -2.37
SHANK1Q9Y566 MTND5P32-201ENST00000560711 1802 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.35-201ENST00000362601 101 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD115-2-201ENST00000362842 82 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1099P-201ENST00000363533 107 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD115-20-201ENST00000365099 82 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORD18B-201ENST00000365659 72 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNY1P6-201ENST00000384193 109 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 AL138752.1-201ENST00000452964 351 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU4-54P-201ENST00000516428 129 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 DNAJC19P2-201ENST00000593340 302 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 MIR6844-201ENST00000637122 62 ntBASIC0.24□□□□□ -2.37
SHANK1Q9Y566 RNU6-1020P-201ENST00000363684 107 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.452-201ENST00000384202 108 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.470-201ENST00000384307 117 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU6-239P-201ENST00000390990 99 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.793-201ENST00000411222 111 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU7-45P-201ENST00000459460 63 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 SNORD116-25-201ENST00000516517 92 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU2-60P-201ENST00000517290 128 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU4-84P-201ENST00000364200 139 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.785-201ENST00000384290 109 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 MIR604-201ENST00000384880 94 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU6-1135P-201ENST00000411083 103 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNU7-79P-201ENST00000516082 62 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 RNY3P16-201ENST00000516338 101 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 FTX_2.1-201ENST00000618816 94 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 U6.109-201ENST00000636749 87 ntBASIC0.23□□□□□ -2.37
SHANK1Q9Y566 SNORA25.7-201ENST00000364375 127 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU4-16P-201ENST00000364737 141 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-574P-201ENST00000384265 107 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-1258P-201ENST00000516911 111 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC130289.1-201ENST00000577321 73 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.757-201ENST00000578934 114 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.8-201ENST00000362353 102 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.536-201ENST00000384621 113 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 Y_RNA.617-201ENST00000410920 90 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC015818.7-201ENST00000428754 109 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC087499.7-201ENST00000441958 109 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AL121914.1-201ENST00000450188 156 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU6-1219P-201ENST00000516143 112 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 RNU2-35P-201ENST00000516446 142 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.22□□□□□ -2.37
SHANK1Q9Y566 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-309P-201ENST00000364573 106 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.297-201ENST00000364950 91 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-1336P-201ENST00000383886 109 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 242.5 ms